Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CD248Q9HCU0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD248Q9HCU0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD248Q9HCU0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD248Q9HCU0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD248Q9HCU0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.82■□□□□ 0.76
CD248Q9HCU0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD248Q9HCU0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CD248Q9HCU0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CD248Q9HCU0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.82■□□□□ 0.76
CD248Q9HCU0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CD248Q9HCU0 AC093484.2-201ENST00000580996 2166 ntBASIC19.81■□□□□ 0.76
CD248Q9HCU0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD248Q9HCU0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.81■□□□□ 0.76
CD248Q9HCU0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.81■□□□□ 0.76
CD248Q9HCU0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD248Q9HCU0 PHGDH-210ENST00000641115 1638 ntBASIC19.81■□□□□ 0.76
CD248Q9HCU0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.81■□□□□ 0.76
CD248Q9HCU0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CD248Q9HCU0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CD248Q9HCU0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD248Q9HCU0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD248Q9HCU0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CD248Q9HCU0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.81■□□□□ 0.76
CD248Q9HCU0 KRT18P57-201ENST00000443599 1254 ntBASIC19.81■□□□□ 0.76
CD248Q9HCU0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.81■□□□□ 0.76
CD248Q9HCU0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CD248Q9HCU0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.81■□□□□ 0.76
CD248Q9HCU0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD248Q9HCU0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD248Q9HCU0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.81■□□□□ 0.76
CD248Q9HCU0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.81■□□□□ 0.76
CD248Q9HCU0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD248Q9HCU0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CD248Q9HCU0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD248Q9HCU0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CD248Q9HCU0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD248Q9HCU0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CD248Q9HCU0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD248Q9HCU0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.8■□□□□ 0.76
CD248Q9HCU0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.8■□□□□ 0.76
CD248Q9HCU0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CD248Q9HCU0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CD248Q9HCU0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD248Q9HCU0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.8■□□□□ 0.76
CD248Q9HCU0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.8■□□□□ 0.76
CD248Q9HCU0 TUBB8P6-201ENST00000436895 1288 ntBASIC19.8■□□□□ 0.76
CD248Q9HCU0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.8■□□□□ 0.76
CD248Q9HCU0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD248Q9HCU0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.8■□□□□ 0.76
CD248Q9HCU0 AL049597.2-201ENST00000565575 961 ntBASIC19.8■□□□□ 0.76
CD248Q9HCU0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.8■□□□□ 0.76
CD248Q9HCU0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.8■□□□□ 0.76
CD248Q9HCU0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD248Q9HCU0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD248Q9HCU0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CD248Q9HCU0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.8■□□□□ 0.76
CD248Q9HCU0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CD248Q9HCU0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD248Q9HCU0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.8■□□□□ 0.76
CD248Q9HCU0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CD248Q9HCU0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD248Q9HCU0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD248Q9HCU0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD248Q9HCU0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD248Q9HCU0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD248Q9HCU0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD248Q9HCU0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.79■□□□□ 0.76
CD248Q9HCU0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.79■□□□□ 0.76
CD248Q9HCU0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD248Q9HCU0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CD248Q9HCU0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.79■□□□□ 0.76
CD248Q9HCU0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.79■□□□□ 0.76
CD248Q9HCU0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.79■□□□□ 0.76
CD248Q9HCU0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.79■□□□□ 0.76
CD248Q9HCU0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CD248Q9HCU0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD248Q9HCU0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD248Q9HCU0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.79■□□□□ 0.76
CD248Q9HCU0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CD248Q9HCU0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CD248Q9HCU0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.79■□□□□ 0.76
CD248Q9HCU0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD248Q9HCU0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CD248Q9HCU0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CD248Q9HCU0 AL138781.2-201ENST00000617896 1843 ntBASIC19.79■□□□□ 0.76
CD248Q9HCU0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD248Q9HCU0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CD248Q9HCU0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CD248Q9HCU0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CD248Q9HCU0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD248Q9HCU0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD248Q9HCU0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CD248Q9HCU0 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.78■□□□□ 0.76
CD248Q9HCU0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CD248Q9HCU0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CD248Q9HCU0 AC020763.4-201ENST00000623414 4170 ntBASIC19.78■□□□□ 0.76
CD248Q9HCU0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.78■□□□□ 0.76
CD248Q9HCU0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.78■□□□□ 0.76
CD248Q9HCU0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms