Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.01■□□□□ 0.47
VCX3BQ9H321 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18■□□□□ 0.47
VCX3BQ9H321 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
VCX3BQ9H321 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
VCX3BQ9H321 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18■□□□□ 0.47
VCX3BQ9H321 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
VCX3BQ9H321 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18■□□□□ 0.47
VCX3BQ9H321 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18■□□□□ 0.47
VCX3BQ9H321 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18■□□□□ 0.47
VCX3BQ9H321 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18■□□□□ 0.47
VCX3BQ9H321 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
VCX3BQ9H321 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
VCX3BQ9H321 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18■□□□□ 0.47
VCX3BQ9H321 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
VCX3BQ9H321 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
VCX3BQ9H321 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3BQ9H321 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.99■□□□□ 0.47
VCX3BQ9H321 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VCX3BQ9H321 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
VCX3BQ9H321 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.99■□□□□ 0.47
VCX3BQ9H321 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VCX3BQ9H321 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VCX3BQ9H321 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
VCX3BQ9H321 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
VCX3BQ9H321 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
VCX3BQ9H321 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.99■□□□□ 0.47
VCX3BQ9H321 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.99■□□□□ 0.47
VCX3BQ9H321 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
VCX3BQ9H321 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3BQ9H321 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
VCX3BQ9H321 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.98■□□□□ 0.47
VCX3BQ9H321 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
VCX3BQ9H321 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 AC079140.4-201ENST00000507448 529 ntBASIC17.98■□□□□ 0.47
VCX3BQ9H321 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.98■□□□□ 0.47
VCX3BQ9H321 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.98■□□□□ 0.47
VCX3BQ9H321 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.98■□□□□ 0.47
VCX3BQ9H321 AL355001.2-201ENST00000620617 1191 ntBASIC17.98■□□□□ 0.47
VCX3BQ9H321 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
VCX3BQ9H321 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.98■□□□□ 0.47
VCX3BQ9H321 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VCX3BQ9H321 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.98■□□□□ 0.47
VCX3BQ9H321 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.98■□□□□ 0.47
VCX3BQ9H321 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VCX3BQ9H321 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.98■□□□□ 0.47
VCX3BQ9H321 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.98■□□□□ 0.47
VCX3BQ9H321 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCX3BQ9H321 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms