Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.69■□□□□ 0.9
TRAIPQ9BWF2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAIPQ9BWF2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAIPQ9BWF2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAIPQ9BWF2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAIPQ9BWF2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAIPQ9BWF2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAIPQ9BWF2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 AL358472.4-201ENST00000633140 710 ntBASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAIPQ9BWF2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAIPQ9BWF2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 AC009947.2-201ENST00000444014 672 ntBASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAIPQ9BWF2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 FAM86EP-206ENST00000510506 987 ntBASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRAIPQ9BWF2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAIPQ9BWF2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.9
TRAIPQ9BWF2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
TRAIPQ9BWF2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 STARP1-201ENST00000397973 869 ntBASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.64■□□□□ 0.89
TRAIPQ9BWF2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms