Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 PRKY-204ENST00000533551 1019 ntBASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM56Q9BRZ2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.27■□□□□ 0.67
TRIM56Q9BRZ2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM56Q9BRZ2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM56Q9BRZ2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM56Q9BRZ2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM56Q9BRZ2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.27■□□□□ 0.67
TRIM56Q9BRZ2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM56Q9BRZ2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.27■□□□□ 0.67
TRIM56Q9BRZ2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM56Q9BRZ2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 AC005082.1-201ENST00000413042 2259 ntBASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 AC066615.1-201ENST00000640911 628 ntBASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM56Q9BRZ2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 ESRRAP1-201ENST00000400596 1257 ntBASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 KRASP1-201ENST00000407852 552 ntBASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 TSPY23P-201ENST00000440136 739 ntBASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 FAM201B-201ENST00000458407 597 ntBASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM56Q9BRZ2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms