Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 RCC2P6-201ENST00000526625 1557 ntBASIC16.3■□□□□ 0.2
GFI1Q99684 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GFI1Q99684 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.3■□□□□ 0.2
GFI1Q99684 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.3■□□□□ 0.2
GFI1Q99684 AC091874.3-201ENST00000512672 1195 ntBASIC16.3■□□□□ 0.2
GFI1Q99684 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.3■□□□□ 0.2
GFI1Q99684 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.3■□□□□ 0.2
GFI1Q99684 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
GFI1Q99684 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GFI1Q99684 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GFI1Q99684 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.3■□□□□ 0.2
GFI1Q99684 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.3■□□□□ 0.2
GFI1Q99684 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.3■□□□□ 0.2
GFI1Q99684 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
GFI1Q99684 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GFI1Q99684 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.3■□□□□ 0.2
GFI1Q99684 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GFI1Q99684 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GFI1Q99684 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GFI1Q99684 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
GFI1Q99684 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.29■□□□□ 0.2
GFI1Q99684 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.29■□□□□ 0.2
GFI1Q99684 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.29■□□□□ 0.2
GFI1Q99684 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.29■□□□□ 0.2
GFI1Q99684 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.29■□□□□ 0.2
GFI1Q99684 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.29■□□□□ 0.2
GFI1Q99684 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.29■□□□□ 0.2
GFI1Q99684 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.29■□□□□ 0.2
GFI1Q99684 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.29■□□□□ 0.2
GFI1Q99684 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 AL121829.2-201ENST00000620908 328 ntBASIC16.29■□□□□ 0.2
GFI1Q99684 AC073111.5-205ENST00000641717 521 ntBASIC16.29■□□□□ 0.2
GFI1Q99684 AC068587.9-201ENST00000641814 219 ntBASIC16.29■□□□□ 0.2
GFI1Q99684 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
GFI1Q99684 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.29■□□□□ 0.2
GFI1Q99684 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.29■□□□□ 0.2
GFI1Q99684 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.29■□□□□ 0.2
GFI1Q99684 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GFI1Q99684 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFI1Q99684 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GFI1Q99684 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFI1Q99684 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFI1Q99684 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFI1Q99684 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.28■□□□□ 0.2
GFI1Q99684 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFI1Q99684 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFI1Q99684 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.28■□□□□ 0.2
GFI1Q99684 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFI1Q99684 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFI1Q99684 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.28■□□□□ 0.2
GFI1Q99684 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GFI1Q99684 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
GFI1Q99684 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GFI1Q99684 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.28■□□□□ 0.2
GFI1Q99684 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.28■□□□□ 0.2
GFI1Q99684 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.28■□□□□ 0.2
GFI1Q99684 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.28■□□□□ 0.2
GFI1Q99684 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.28■□□□□ 0.2
GFI1Q99684 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.28■□□□□ 0.2
GFI1Q99684 AC120498.8-201ENST00000614275 531 ntBASIC16.28■□□□□ 0.2
GFI1Q99684 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFI1Q99684 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFI1Q99684 AC093677.2-201ENST00000600169 1863 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms