Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 MIR658-201ENST00000385210 100 ntBASIC5.76□□□□□ -1.49
HMCN1Q96RW7 AC051619.7-201ENST00000568314 623 ntBASIC5.76□□□□□ -1.49
HMCN1Q96RW7 MIR6727-201ENST00000620702 65 ntBASIC5.76□□□□□ -1.49
HMCN1Q96RW7 AC025048.6-201ENST00000634326 1161 ntBASIC5.76□□□□□ -1.49
HMCN1Q96RW7 AL358472.5-202ENST00000641448 1267 ntBASIC5.76□□□□□ -1.49
HMCN1Q96RW7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 AC125634.1-201ENST00000438758 1403 ntBASIC5.76□□□□□ -1.49
HMCN1Q96RW7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC5.76□□□□□ -1.49
HMCN1Q96RW7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 AC064836.3-201ENST00000607928 673 ntBASIC5.75□□□□□ -1.49
HMCN1Q96RW7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 AC092910.1-201ENST00000482027 1129 ntBASIC5.75□□□□□ -1.49
HMCN1Q96RW7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC5.75□□□□□ -1.49
HMCN1Q96RW7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 DDT-206ENST00000430101 573 ntTSL 2 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 AC124864.1-201ENST00000623408 392 ntBASIC5.75□□□□□ -1.49
HMCN1Q96RW7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC5.75□□□□□ -1.49
HMCN1Q96RW7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms