Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 Z98044.1-201ENST00000632503 1764 ntBASIC18.18■□□□□ 0.5
UBE2E3Q969T4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 AC093503.3-201ENST00000624917 2352 ntBASIC18.17■□□□□ 0.5
UBE2E3Q969T4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 MESTP1-201ENST00000404287 994 ntBASIC18.17■□□□□ 0.5
UBE2E3Q969T4 AC008550.1-201ENST00000511500 884 ntBASIC18.17■□□□□ 0.5
UBE2E3Q969T4 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2E3Q969T4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 AC004408.2-201ENST00000623613 2777 ntBASIC18.16■□□□□ 0.5
UBE2E3Q969T4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 Z99916.2-201ENST00000604037 246 ntBASIC18.16■□□□□ 0.5
UBE2E3Q969T4 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.16■□□□□ 0.5
UBE2E3Q969T4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2E3Q969T4 AC096733.2-201ENST00000609937 1394 ntBASIC18.16■□□□□ 0.5
UBE2E3Q969T4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 AL138781.2-201ENST00000617896 1843 ntBASIC18.15■□□□□ 0.5
UBE2E3Q969T4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 AC026471.5-201ENST00000615068 467 ntBASIC18.15■□□□□ 0.5
UBE2E3Q969T4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 AC020763.4-201ENST00000623414 4170 ntBASIC18.15■□□□□ 0.5
UBE2E3Q969T4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE2E3Q969T4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms