Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM54Q969K7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM54Q969K7 AL596275.1-201ENST00000423464 877 ntBASIC16.65■□□□□ 0.26
TMEM54Q969K7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.65■□□□□ 0.26
TMEM54Q969K7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM54Q969K7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.65■□□□□ 0.26
TMEM54Q969K7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM54Q969K7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TMEM54Q969K7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TMEM54Q969K7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM54Q969K7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM54Q969K7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM54Q969K7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM54Q969K7 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.65■□□□□ 0.26
TMEM54Q969K7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM54Q969K7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TMEM54Q969K7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM54Q969K7 RCC2P3-201ENST00000418112 1537 ntBASIC16.65■□□□□ 0.26
TMEM54Q969K7 MTMR9LP-203ENST00000426597 1545 ntBASIC16.65■□□□□ 0.26
TMEM54Q969K7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM54Q969K7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM54Q969K7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TMEM54Q969K7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.64■□□□□ 0.26
TMEM54Q969K7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
TMEM54Q969K7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
TMEM54Q969K7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM54Q969K7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM54Q969K7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TMEM54Q969K7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM54Q969K7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM54Q969K7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TMEM54Q969K7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM54Q969K7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM54Q969K7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM54Q969K7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM54Q969K7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM54Q969K7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.64■□□□□ 0.25
TMEM54Q969K7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.64■□□□□ 0.25
TMEM54Q969K7 MIR1238-201ENST00000408483 83 ntBASIC16.64■□□□□ 0.25
TMEM54Q969K7 AL390955.1-201ENST00000428694 934 ntBASIC16.64■□□□□ 0.25
TMEM54Q969K7 TSPY15P-201ENST00000457163 923 ntBASIC16.64■□□□□ 0.25
TMEM54Q969K7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM54Q969K7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM54Q969K7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
TMEM54Q969K7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM54Q969K7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
TMEM54Q969K7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM54Q969K7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM54Q969K7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM54Q969K7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM54Q969K7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM54Q969K7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM54Q969K7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM54Q969K7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM54Q969K7 ANO7L1-203ENST00000602586 1720 ntBASIC16.63■□□□□ 0.25
TMEM54Q969K7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM54Q969K7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM54Q969K7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.63■□□□□ 0.25
TMEM54Q969K7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM54Q969K7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM54Q969K7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM54Q969K7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM54Q969K7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM54Q969K7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM54Q969K7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM54Q969K7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM54Q969K7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.62■□□□□ 0.25
TMEM54Q969K7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM54Q969K7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM54Q969K7 SLC25A1P2-201ENST00000430693 912 ntBASIC16.62■□□□□ 0.25
TMEM54Q969K7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM54Q969K7 AL023803.3-201ENST00000615559 522 ntBASIC16.62■□□□□ 0.25
TMEM54Q969K7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM54Q969K7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
TMEM54Q969K7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM54Q969K7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
TMEM54Q969K7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM54Q969K7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TMEM54Q969K7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM54Q969K7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TMEM54Q969K7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM54Q969K7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM54Q969K7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM54Q969K7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM54Q969K7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM54Q969K7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM54Q969K7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM54Q969K7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM54Q969K7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM54Q969K7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
TMEM54Q969K7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM54Q969K7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM54Q969K7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TMEM54Q969K7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM54Q969K7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM54Q969K7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TMEM54Q969K7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM54Q969K7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM54Q969K7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM54Q969K7 AL023284.2-201ENST00000405850 579 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms