Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 AC133681.1-201ENST00000465482 601 ntBASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 AC124016.1-201ENST00000609552 612 ntBASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 AC110285.5-201ENST00000611501 352 ntBASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 BCL2-203ENST00000589955 5011 ntBASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 NOC2LP1-202ENST00000452600 2235 ntBASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 AC135050.7-201ENST00000624508 2218 ntBASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.68■□□□□ 0.74
CCHCR1Q8TD31 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CCHCR1Q8TD31 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 AL158047.1-201ENST00000445918 881 ntBASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 AL359736.2-201ENST00000621992 437 ntBASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCHCR1Q8TD31 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 AC104581.1-202ENST00000635932 2618 ntBASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms