Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 KRT8P41-201ENST00000533985 1514 ntBASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 NIFKP9-201ENST00000419265 221 ntBASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 TSPY23P-201ENST00000440136 739 ntBASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 AL353708.3-201ENST00000610272 989 ntBASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 ITM2C-210ENST00000620962 501 ntBASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 AC006333.2-201ENST00000607957 2099 ntBASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF439Q8NDP4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 TSPY20P-201ENST00000450910 630 ntBASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 AC093503.3-201ENST00000624917 2352 ntBASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 HTR7P1-201ENST00000538670 1336 ntBASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF439Q8NDP4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
ZNF439Q8NDP4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
ZNF439Q8NDP4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 FAM201B-201ENST00000458407 597 ntBASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 CROCCP3-202ENST00000420820 1947 ntBASIC15.64■□□□□ 0.09
ZNF439Q8NDP4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms