Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 KRT8P8-201ENST00000434750 1448 ntBASIC18.47■□□□□ 0.55
CPSF7Q8N684 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.46■□□□□ 0.55
CPSF7Q8N684 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.46■□□□□ 0.55
CPSF7Q8N684 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CPSF7Q8N684 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CPSF7Q8N684 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CPSF7Q8N684 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.46■□□□□ 0.55
CPSF7Q8N684 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.46■□□□□ 0.55
CPSF7Q8N684 AC005829.2-201ENST00000571422 1056 ntBASIC18.46■□□□□ 0.55
CPSF7Q8N684 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.46■□□□□ 0.55
CPSF7Q8N684 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CPSF7Q8N684 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPSF7Q8N684 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CPSF7Q8N684 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CPSF7Q8N684 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF7Q8N684 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF7Q8N684 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF7Q8N684 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF7Q8N684 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF7Q8N684 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF7Q8N684 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF7Q8N684 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF7Q8N684 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF7Q8N684 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF7Q8N684 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF7Q8N684 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF7Q8N684 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPSF7Q8N684 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CPSF7Q8N684 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.44■□□□□ 0.54
CPSF7Q8N684 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.44■□□□□ 0.54
CPSF7Q8N684 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
CPSF7Q8N684 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.44■□□□□ 0.54
CPSF7Q8N684 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.44■□□□□ 0.54
CPSF7Q8N684 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CPSF7Q8N684 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.44■□□□□ 0.54
CPSF7Q8N684 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.44■□□□□ 0.54
CPSF7Q8N684 AC008550.1-201ENST00000511500 884 ntBASIC18.44■□□□□ 0.54
CPSF7Q8N684 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPSF7Q8N684 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms