Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 AC004408.2-201ENST00000623613 2777 ntBASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 AP000692.2-201ENST00000608391 879 ntBASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC33Q8N5R6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC33Q8N5R6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 AC004951.3-201ENST00000418645 1148 ntBASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 FAM87A-204ENST00000613235 858 ntBASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC33Q8N5R6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms