Protein–RNA interactions for Protein: Q8IZU3

SYCP3, Synaptonemal complex protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3Q8IZU3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 AC096733.2-201ENST00000609937 1394 ntBASIC20.85■□□□□ 0.93
SYCP3Q8IZU3 AC098818.2-201ENST00000564925 2320 ntBASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 AC079598.2-202ENST00000546624 1451 ntBASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 BX323043.1-201ENST00000641006 1765 ntBASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCP3Q8IZU3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.83■□□□□ 0.93
SYCP3Q8IZU3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYCP3Q8IZU3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.83■□□□□ 0.93
SYCP3Q8IZU3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.83■□□□□ 0.93
SYCP3Q8IZU3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.83■□□□□ 0.93
SYCP3Q8IZU3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYCP3Q8IZU3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.83■□□□□ 0.93
SYCP3Q8IZU3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.83■□□□□ 0.93
SYCP3Q8IZU3 MIR1238-201ENST00000408483 83 ntBASIC20.83■□□□□ 0.93
SYCP3Q8IZU3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SYCP3Q8IZU3 TSPY15P-201ENST00000457163 923 ntBASIC20.83■□□□□ 0.93
SYCP3Q8IZU3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYCP3Q8IZU3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYCP3Q8IZU3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.83■□□□□ 0.92
SYCP3Q8IZU3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYCP3Q8IZU3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 BCL2-203ENST00000589955 5011 ntBASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 AL390955.1-201ENST00000428694 934 ntBASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCP3Q8IZU3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCP3Q8IZU3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SYCP3Q8IZU3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCP3Q8IZU3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCP3Q8IZU3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SYCP3Q8IZU3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.81■□□□□ 0.92
SYCP3Q8IZU3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms