Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC26.25■■□□□ 1.79
XRN1Q8IZH2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC26.25■■□□□ 1.79
XRN1Q8IZH2 TEX21P-204ENST00000641479 1693 ntBASIC26.25■■□□□ 1.79
XRN1Q8IZH2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC26.25■■□□□ 1.79
XRN1Q8IZH2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
XRN1Q8IZH2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
XRN1Q8IZH2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
XRN1Q8IZH2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
XRN1Q8IZH2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
XRN1Q8IZH2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC26.24■■□□□ 1.79
XRN1Q8IZH2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC26.24■■□□□ 1.79
XRN1Q8IZH2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
XRN1Q8IZH2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC26.24■■□□□ 1.79
XRN1Q8IZH2 LINC01711-201ENST00000598340 967 ntBASIC26.24■■□□□ 1.79
XRN1Q8IZH2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC26.24■■□□□ 1.79
XRN1Q8IZH2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC26.24■■□□□ 1.79
XRN1Q8IZH2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
XRN1Q8IZH2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
XRN1Q8IZH2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
XRN1Q8IZH2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC26.24■■□□□ 1.79
XRN1Q8IZH2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
XRN1Q8IZH2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
XRN1Q8IZH2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
XRN1Q8IZH2 AF228730.7-201ENST00000641842 219 ntBASIC26.23■■□□□ 1.79
XRN1Q8IZH2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC26.23■■□□□ 1.79
XRN1Q8IZH2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
XRN1Q8IZH2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
XRN1Q8IZH2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
XRN1Q8IZH2 AL512353.2-201ENST00000448759 1962 ntBASIC26.22■■□□□ 1.79
XRN1Q8IZH2 KRT18P67-201ENST00000432816 1264 ntBASIC26.22■■□□□ 1.79
XRN1Q8IZH2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 AC117500.6-201ENST00000624871 588 ntBASIC26.22■■□□□ 1.79
XRN1Q8IZH2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC26.22■■□□□ 1.79
XRN1Q8IZH2 KATNBL1P6-202ENST00000562413 1466 ntBASIC26.21■■□□□ 1.79
XRN1Q8IZH2 KRT89P-201ENST00000620027 1478 ntBASIC26.21■■□□□ 1.79
XRN1Q8IZH2 AL391422.3-201ENST00000603791 2761 ntBASIC26.21■■□□□ 1.79
XRN1Q8IZH2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
XRN1Q8IZH2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
XRN1Q8IZH2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
XRN1Q8IZH2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC26.21■■□□□ 1.79
XRN1Q8IZH2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
XRN1Q8IZH2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
XRN1Q8IZH2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC26.21■■□□□ 1.79
XRN1Q8IZH2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC26.21■■□□□ 1.79
XRN1Q8IZH2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC26.21■■□□□ 1.79
XRN1Q8IZH2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
XRN1Q8IZH2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
XRN1Q8IZH2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
XRN1Q8IZH2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
XRN1Q8IZH2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC26.2■■□□□ 1.79
XRN1Q8IZH2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
XRN1Q8IZH2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
XRN1Q8IZH2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
XRN1Q8IZH2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
XRN1Q8IZH2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
XRN1Q8IZH2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
XRN1Q8IZH2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
XRN1Q8IZH2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC26.2■■□□□ 1.78
XRN1Q8IZH2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
XRN1Q8IZH2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
XRN1Q8IZH2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
XRN1Q8IZH2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 VENTXP7-201ENST00000475503 772 ntBASIC26.19■■□□□ 1.78
XRN1Q8IZH2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 MIR3180-4-201ENST00000582223 153 ntBASIC26.19■■□□□ 1.78
XRN1Q8IZH2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 AC148477.8-201ENST00000624298 468 ntBASIC26.19■■□□□ 1.78
XRN1Q8IZH2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
XRN1Q8IZH2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
XRN1Q8IZH2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms