Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC71Q8IV32 AL353708.3-201ENST00000610272 989 ntBASIC17.72■□□□□ 0.43
CCDC71Q8IV32 AL121906.2-201ENST00000621597 723 ntBASIC17.72■□□□□ 0.43
CCDC71Q8IV32 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71Q8IV32 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC71Q8IV32 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC71Q8IV32 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC71Q8IV32 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71Q8IV32 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71Q8IV32 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71Q8IV32 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71Q8IV32 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71Q8IV32 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC71Q8IV32 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 AC097493.4-201ENST00000641197 219 ntBASIC17.71■□□□□ 0.43
CCDC71Q8IV32 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 NOC2LP1-202ENST00000452600 2235 ntBASIC17.71■□□□□ 0.43
CCDC71Q8IV32 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71Q8IV32 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.71■□□□□ 0.42
CCDC71Q8IV32 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC71Q8IV32 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC71Q8IV32 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71Q8IV32 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 RCN1P1-201ENST00000400413 996 ntBASIC17.69■□□□□ 0.42
CCDC71Q8IV32 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 AL353807.1-201ENST00000427475 662 ntBASIC17.69■□□□□ 0.42
CCDC71Q8IV32 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 AC012306.2-201ENST00000609350 630 ntBASIC17.69■□□□□ 0.42
CCDC71Q8IV32 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC71Q8IV32 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms