Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 SPDYE15P-201ENST00000424157 909 ntBASIC20.01■□□□□ 0.79
RNF135Q8IUD6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 NEK4P2-201ENST00000580004 1012 ntBASIC20.01■□□□□ 0.79
RNF135Q8IUD6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF135Q8IUD6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF135Q8IUD6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF135Q8IUD6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20■□□□□ 0.79
RNF135Q8IUD6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF135Q8IUD6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF135Q8IUD6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RNF135Q8IUD6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF135Q8IUD6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF135Q8IUD6 TSSC2-201ENST00000450217 709 ntBASIC20■□□□□ 0.79
RNF135Q8IUD6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20■□□□□ 0.79
RNF135Q8IUD6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20■□□□□ 0.79
RNF135Q8IUD6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20■□□□□ 0.79
RNF135Q8IUD6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RNF135Q8IUD6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RNF135Q8IUD6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RNF135Q8IUD6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RNF135Q8IUD6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20■□□□□ 0.79
RNF135Q8IUD6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF135Q8IUD6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF135Q8IUD6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF135Q8IUD6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 AL645929.1-201ENST00000420084 975 ntBASIC19.99■□□□□ 0.79
RNF135Q8IUD6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 IFNL4P1-201ENST00000607083 540 ntBASIC19.99■□□□□ 0.79
RNF135Q8IUD6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RNF135Q8IUD6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.98■□□□□ 0.79
RNF135Q8IUD6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 MIR3180-1-201ENST00000580374 94 ntBASIC19.98■□□□□ 0.79
RNF135Q8IUD6 MIR3180-3-201ENST00000584616 94 ntBASIC19.98■□□□□ 0.79
RNF135Q8IUD6 AL031008.1-201ENST00000619963 541 ntBASIC19.98■□□□□ 0.79
RNF135Q8IUD6 AC138932.1-201ENST00000534164 6830 ntBASIC19.98■□□□□ 0.79
RNF135Q8IUD6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF135Q8IUD6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms