Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
TRIM50Q86XT4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM50Q86XT4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM50Q86XT4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM50Q86XT4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM50Q86XT4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM50Q86XT4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 KRT8P3-201ENST00000519669 1449 ntBASIC21.07■□□□□ 0.96
TRIM50Q86XT4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM50Q86XT4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
TRIM50Q86XT4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM50Q86XT4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.06■□□□□ 0.96
TRIM50Q86XT4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM50Q86XT4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
TRIM50Q86XT4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM50Q86XT4 MCCD1P1-208ENST00000445732 328 ntBASIC21.06■□□□□ 0.96
TRIM50Q86XT4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.06■□□□□ 0.96
TRIM50Q86XT4 AC024243.1-201ENST00000609234 778 ntBASIC21.06■□□□□ 0.96
TRIM50Q86XT4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TRIM50Q86XT4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM50Q86XT4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM50Q86XT4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM50Q86XT4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM50Q86XT4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM50Q86XT4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 SPDYE13P-201ENST00000445314 798 ntBASIC21.05■□□□□ 0.96
TRIM50Q86XT4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 VENTXP5-201ENST00000523979 775 ntBASIC21.05■□□□□ 0.96
TRIM50Q86XT4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM50Q86XT4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 AC093458.2-201ENST00000623150 629 ntBASIC21.04■□□□□ 0.96
TRIM50Q86XT4 AC116407.4-201ENST00000623319 1061 ntBASIC21.04■□□□□ 0.96
TRIM50Q86XT4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM50Q86XT4 LINC01311-201ENST00000565162 1445 ntBASIC21.04■□□□□ 0.96
TRIM50Q86XT4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM50Q86XT4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms