Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 AC008040.2-201ENST00000461049 708 ntBASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
HIST2H3AQ71DI3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 AL512353.2-201ENST00000448759 1962 ntBASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 MESTP1-201ENST00000404287 994 ntBASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 UBE2SP1-201ENST00000450587 669 ntBASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 AC011506.1-201ENST00000474329 610 ntBASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 MIR6786-201ENST00000616843 113 ntBASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 AC011298.2-201ENST00000617989 482 ntBASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HIST2H3AQ71DI3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST2H3AQ71DI3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST2H3AQ71DI3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST2H3AQ71DI3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HIST2H3AQ71DI3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST2H3AQ71DI3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST2H3AQ71DI3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 ABHD17AP1-201ENST00000358206 933 ntBASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 B3GAT3P1-201ENST00000471720 806 ntBASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 AC090340.1-201ENST00000620778 4980 ntBASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms