Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 PCDHA12-202ENST00000613593 2588 ntBASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 IRX1P1-201ENST00000438849 1838 ntBASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 AC105233.4-201ENST00000642045 216 ntBASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
KCNIP4Q6PIL6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
KCNIP4Q6PIL6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 AC012317.2-201ENST00000623305 2251 ntBASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 AC142381.2-201ENST00000566120 298 ntBASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 AC134043.2-201ENST00000624206 2238 ntBASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
KCNIP4Q6PIL6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 AC133561.4-201ENST00000566112 224 ntBASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms