Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 AC116351.2-201ENST00000606540 1585 ntBASIC17.28■□□□□ 0.36
TMEM53Q6P2H8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 AC018553.1-201ENST00000616682 1458 ntBASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 ESRRAP1-201ENST00000400596 1257 ntBASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TMEM53Q6P2H8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.27■□□□□ 0.35
TMEM53Q6P2H8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM53Q6P2H8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM53Q6P2H8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.27■□□□□ 0.35
TMEM53Q6P2H8 AC009237.14-201ENST00000609975 1594 ntBASIC17.27■□□□□ 0.35
TMEM53Q6P2H8 AL162727.3-201ENST00000635661 2787 ntBASIC17.27■□□□□ 0.35
TMEM53Q6P2H8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.27■□□□□ 0.35
TMEM53Q6P2H8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM53Q6P2H8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 PRKY-204ENST00000533551 1019 ntBASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 CICP6-201ENST00000457191 2729 ntBASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM53Q6P2H8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM53Q6P2H8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM53Q6P2H8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM53Q6P2H8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM53Q6P2H8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TMEM53Q6P2H8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TMEM53Q6P2H8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM53Q6P2H8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM53Q6P2H8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM53Q6P2H8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEM53Q6P2H8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms