Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 AL499627.1-201ENST00000569373 2188 ntBASIC19.66■□□□□ 0.74
TRNP1Q6NT89 ANO7L1-203ENST00000602586 1720 ntBASIC19.66■□□□□ 0.74
TRNP1Q6NT89 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 MMP23A-201ENST00000234610 1017 ntBASIC19.66■□□□□ 0.74
TRNP1Q6NT89 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 AC092338.2-201ENST00000568827 1415 ntBASIC19.66■□□□□ 0.74
TRNP1Q6NT89 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 AC008556.1-201ENST00000610908 2040 ntBASIC19.66■□□□□ 0.74
TRNP1Q6NT89 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRNP1Q6NT89 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 Z98044.1-201ENST00000632503 1764 ntBASIC19.65■□□□□ 0.74
TRNP1Q6NT89 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRNP1Q6NT89 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRNP1Q6NT89 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
TRNP1Q6NT89 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRNP1Q6NT89 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRNP1Q6NT89 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.64■□□□□ 0.73
TRNP1Q6NT89 AP003041.3-201ENST00000527151 707 ntBASIC19.64■□□□□ 0.73
TRNP1Q6NT89 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.64■□□□□ 0.73
TRNP1Q6NT89 AL353719.1-201ENST00000566847 864 ntBASIC19.64■□□□□ 0.73
TRNP1Q6NT89 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.64■□□□□ 0.73
TRNP1Q6NT89 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.64■□□□□ 0.73
TRNP1Q6NT89 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.64■□□□□ 0.73
TRNP1Q6NT89 AL357033.4-201ENST00000617703 1807 ntBASIC19.64■□□□□ 0.73
TRNP1Q6NT89 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRNP1Q6NT89 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRNP1Q6NT89 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRNP1Q6NT89 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.64■□□□□ 0.73
TRNP1Q6NT89 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRNP1Q6NT89 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
TRNP1Q6NT89 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRNP1Q6NT89 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRNP1Q6NT89 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRNP1Q6NT89 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 TSPY14P-201ENST00000303979 915 ntBASIC19.63■□□□□ 0.73
TRNP1Q6NT89 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 SLC25A1P2-201ENST00000430693 912 ntBASIC19.63■□□□□ 0.73
TRNP1Q6NT89 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 AC007663.1-201ENST00000438948 1240 ntBASIC19.63■□□□□ 0.73
TRNP1Q6NT89 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.63■□□□□ 0.73
TRNP1Q6NT89 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRNP1Q6NT89 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms