Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 AC106739.1-201ENST00000617035 715 ntBASIC17.83■□□□□ 0.44
LPCAT4Q643R3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LPCAT4Q643R3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 AC116351.2-201ENST00000606540 1585 ntBASIC17.82■□□□□ 0.44
LPCAT4Q643R3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 AC008894.3-201ENST00000624324 3103 ntBASIC17.82■□□□□ 0.44
LPCAT4Q643R3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LPCAT4Q643R3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LPCAT4Q643R3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms