Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 TSPY23P-201ENST00000440136 739 ntBASIC18.37■□□□□ 0.53
SGO1Q5FBB7 AC128676.1-201ENST00000454392 318 ntBASIC18.37■□□□□ 0.53
SGO1Q5FBB7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGO1Q5FBB7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 AC110285.5-201ENST00000611501 352 ntBASIC18.36■□□□□ 0.53
SGO1Q5FBB7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SGO1Q5FBB7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 TSPY21P-201ENST00000433481 731 ntBASIC18.35■□□□□ 0.53
SGO1Q5FBB7 C1QBPP2-201ENST00000528754 825 ntBASIC18.35■□□□□ 0.53
SGO1Q5FBB7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SGO1Q5FBB7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.34■□□□□ 0.53
SGO1Q5FBB7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms