Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.29■□□□□ 0.52
ATP6AP1LQ52LC2 HLA-A-209ENST00000638375 975 ntBASIC18.29■□□□□ 0.52
ATP6AP1LQ52LC2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ATP6AP1LQ52LC2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
ATP6AP1LQ52LC2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ATP6AP1LQ52LC2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6AP1LQ52LC2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6AP1LQ52LC2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ATP6AP1LQ52LC2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6AP1LQ52LC2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6AP1LQ52LC2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6AP1LQ52LC2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 TSPY23P-201ENST00000440136 739 ntBASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 UNC93B5-201ENST00000530315 699 ntBASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 AC104771.1-201ENST00000603335 964 ntBASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6AP1LQ52LC2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6AP1LQ52LC2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.27■□□□□ 0.51
ATP6AP1LQ52LC2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP6AP1LQ52LC2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
ATP6AP1LQ52LC2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.27■□□□□ 0.51
ATP6AP1LQ52LC2 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.27■□□□□ 0.51
ATP6AP1LQ52LC2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.27■□□□□ 0.51
ATP6AP1LQ52LC2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.27■□□□□ 0.51
ATP6AP1LQ52LC2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 AC026471.1-201ENST00000564629 3026 ntBASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ATP6AP1LQ52LC2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms