Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
IRX4P78413 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
IRX4P78413 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IRX4P78413 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IRX4P78413 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IRX4P78413 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
IRX4P78413 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
IRX4P78413 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
IRX4P78413 AC093503.3-201ENST00000624917 2352 ntBASIC19.61■□□□□ 0.73
IRX4P78413 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
IRX4P78413 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
IRX4P78413 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
IRX4P78413 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.61■□□□□ 0.73
IRX4P78413 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.61■□□□□ 0.73
IRX4P78413 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.61■□□□□ 0.73
IRX4P78413 ECEL1P2-202ENST00000465689 757 ntBASIC19.61■□□□□ 0.73
IRX4P78413 C2orf69P3-201ENST00000565542 1120 ntBASIC19.61■□□□□ 0.73
IRX4P78413 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.61■□□□□ 0.73
IRX4P78413 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.61■□□□□ 0.73
IRX4P78413 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
IRX4P78413 AL031985.4-201ENST00000642138 673 ntBASIC19.61■□□□□ 0.73
IRX4P78413 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IRX4P78413 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
IRX4P78413 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.61■□□□□ 0.73
IRX4P78413 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IRX4P78413 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.61■□□□□ 0.73
IRX4P78413 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.6■□□□□ 0.73
IRX4P78413 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
IRX4P78413 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.6■□□□□ 0.73
IRX4P78413 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.6■□□□□ 0.73
IRX4P78413 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.6■□□□□ 0.73
IRX4P78413 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.6■□□□□ 0.73
IRX4P78413 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.6■□□□□ 0.73
IRX4P78413 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.6■□□□□ 0.73
IRX4P78413 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
IRX4P78413 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
IRX4P78413 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.6■□□□□ 0.73
IRX4P78413 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IRX4P78413 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
IRX4P78413 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
IRX4P78413 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.59■□□□□ 0.73
IRX4P78413 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
IRX4P78413 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.59■□□□□ 0.73
IRX4P78413 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.59■□□□□ 0.73
IRX4P78413 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.59■□□□□ 0.73
IRX4P78413 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.59■□□□□ 0.73
IRX4P78413 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
IRX4P78413 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.59■□□□□ 0.73
IRX4P78413 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 FSCN1P1-201ENST00000568912 1481 ntBASIC19.59■□□□□ 0.73
IRX4P78413 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX4P78413 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.59■□□□□ 0.73
IRX4P78413 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.59■□□□□ 0.73
IRX4P78413 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
IRX4P78413 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IRX4P78413 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
IRX4P78413 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.58■□□□□ 0.73
IRX4P78413 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
IRX4P78413 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
IRX4P78413 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
IRX4P78413 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IRX4P78413 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
IRX4P78413 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
IRX4P78413 HLA-G-202ENST00000376815 851 ntBASIC19.58■□□□□ 0.72
IRX4P78413 HLA-G-203ENST00000376818 1127 ntBASIC19.58■□□□□ 0.72
IRX4P78413 MESTP1-201ENST00000404287 994 ntBASIC19.58■□□□□ 0.72
IRX4P78413 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX4P78413 UPK3BP1-201ENST00000428678 509 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms