Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAE1P78406 ABHD17AP1-201ENST00000358206 933 ntBASIC17.94■□□□□ 0.46
RAE1P78406 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAE1P78406 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.94■□□□□ 0.46
RAE1P78406 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.94■□□□□ 0.46
RAE1P78406 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.94■□□□□ 0.46
RAE1P78406 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.94■□□□□ 0.46
RAE1P78406 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.94■□□□□ 0.46
RAE1P78406 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
RAE1P78406 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RAE1P78406 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.94■□□□□ 0.46
RAE1P78406 AL135905.2-201ENST00000584934 1404 ntBASIC17.94■□□□□ 0.46
RAE1P78406 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAE1P78406 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAE1P78406 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAE1P78406 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAE1P78406 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAE1P78406 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.93■□□□□ 0.46
RAE1P78406 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAE1P78406 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAE1P78406 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAE1P78406 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.93■□□□□ 0.46
RAE1P78406 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAE1P78406 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.93■□□□□ 0.46
RAE1P78406 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAE1P78406 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.93■□□□□ 0.46
RAE1P78406 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.93■□□□□ 0.46
RAE1P78406 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.93■□□□□ 0.46
RAE1P78406 RPS2P55-201ENST00000397318 883 ntBASIC17.93■□□□□ 0.46
RAE1P78406 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.93■□□□□ 0.46
RAE1P78406 AC107956.1-201ENST00000494359 873 ntBASIC17.93■□□□□ 0.46
RAE1P78406 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAE1P78406 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RAE1P78406 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.93■□□□□ 0.46
RAE1P78406 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAE1P78406 AP000692.2-201ENST00000608391 879 ntBASIC17.93■□□□□ 0.46
RAE1P78406 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAE1P78406 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAE1P78406 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.93■□□□□ 0.46
RAE1P78406 FSCN1P1-201ENST00000568912 1481 ntBASIC17.93■□□□□ 0.46
RAE1P78406 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RAE1P78406 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RAE1P78406 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAE1P78406 AL499627.1-201ENST00000569373 2188 ntBASIC17.93■□□□□ 0.46
RAE1P78406 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAE1P78406 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RAE1P78406 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RAE1P78406 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.92■□□□□ 0.46
RAE1P78406 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RAE1P78406 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAE1P78406 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.92■□□□□ 0.46
RAE1P78406 UBE2SP1-201ENST00000450587 669 ntBASIC17.92■□□□□ 0.46
RAE1P78406 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAE1P78406 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RAE1P78406 AC116562.2-201ENST00000507042 360 ntBASIC17.92■□□□□ 0.46
RAE1P78406 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.92■□□□□ 0.46
RAE1P78406 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.92■□□□□ 0.46
RAE1P78406 AC113410.3-201ENST00000623366 203 ntBASIC17.92■□□□□ 0.46
RAE1P78406 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.92■□□□□ 0.46
RAE1P78406 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.92■□□□□ 0.46
RAE1P78406 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAE1P78406 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAE1P78406 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RAE1P78406 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RAE1P78406 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAE1P78406 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RAE1P78406 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RAE1P78406 AC126763.1-201ENST00000552015 2118 ntBASIC17.92■□□□□ 0.46
RAE1P78406 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.92■□□□□ 0.46
RAE1P78406 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAE1P78406 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAE1P78406 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.91■□□□□ 0.46
RAE1P78406 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.91■□□□□ 0.46
RAE1P78406 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAE1P78406 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.91■□□□□ 0.46
RAE1P78406 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.91■□□□□ 0.46
RAE1P78406 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAE1P78406 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAE1P78406 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.91■□□□□ 0.46
RAE1P78406 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.91■□□□□ 0.46
RAE1P78406 NUDT16P1-203ENST00000513809 620 ntBASIC17.91■□□□□ 0.46
RAE1P78406 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.91■□□□□ 0.46
RAE1P78406 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAE1P78406 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAE1P78406 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAE1P78406 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.91■□□□□ 0.46
RAE1P78406 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAE1P78406 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAE1P78406 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RAE1P78406 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAE1P78406 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RAE1P78406 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAE1P78406 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAE1P78406 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAE1P78406 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAE1P78406 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RAE1P78406 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAE1P78406 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RAE1P78406 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms