Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.9■□□□□ 0.3
CLRN1P58418 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.9■□□□□ 0.3
CLRN1P58418 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLRN1P58418 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.9■□□□□ 0.3
CLRN1P58418 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLRN1P58418 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLRN1P58418 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CLRN1P58418 AC093503.3-201ENST00000624917 2352 ntBASIC16.89■□□□□ 0.3
CLRN1P58418 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLRN1P58418 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLRN1P58418 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.89■□□□□ 0.29
CLRN1P58418 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.89■□□□□ 0.29
CLRN1P58418 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLRN1P58418 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.89■□□□□ 0.29
CLRN1P58418 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLRN1P58418 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLRN1P58418 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CLRN1P58418 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLRN1P58418 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.89■□□□□ 0.29
CLRN1P58418 FAM197Y1-201ENST00000421178 764 ntBASIC16.89■□□□□ 0.29
CLRN1P58418 AC091390.4-202ENST00000476426 537 ntBASIC16.89■□□□□ 0.29
CLRN1P58418 PRSS44-201ENST00000515154 1146 ntBASIC16.89■□□□□ 0.29
CLRN1P58418 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.89■□□□□ 0.29
CLRN1P58418 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.89■□□□□ 0.29
CLRN1P58418 AP001412.1-201ENST00000608405 714 ntBASIC16.89■□□□□ 0.29
CLRN1P58418 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.89■□□□□ 0.29
CLRN1P58418 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLRN1P58418 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CLRN1P58418 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.89■□□□□ 0.29
CLRN1P58418 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CLRN1P58418 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLRN1P58418 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CLRN1P58418 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CLRN1P58418 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLRN1P58418 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLRN1P58418 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 KRT8P11-201ENST00000409686 1436 ntBASIC16.88■□□□□ 0.29
CLRN1P58418 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.88■□□□□ 0.29
CLRN1P58418 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLRN1P58418 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CLRN1P58418 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.88■□□□□ 0.29
CLRN1P58418 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.88■□□□□ 0.29
CLRN1P58418 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 CD177P1-201ENST00000606252 935 ntBASIC16.88■□□□□ 0.29
CLRN1P58418 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CLRN1P58418 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CLRN1P58418 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CLRN1P58418 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLRN1P58418 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.87■□□□□ 0.29
CLRN1P58418 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLRN1P58418 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLRN1P58418 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.87■□□□□ 0.29
CLRN1P58418 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLRN1P58418 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLRN1P58418 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLRN1P58418 FAM207BP-201ENST00000447172 505 ntBASIC16.87■□□□□ 0.29
CLRN1P58418 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.87■□□□□ 0.29
CLRN1P58418 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.87■□□□□ 0.29
CLRN1P58418 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.87■□□□□ 0.29
CLRN1P58418 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.87■□□□□ 0.29
CLRN1P58418 MIR6786-201ENST00000616843 113 ntBASIC16.87■□□□□ 0.29
CLRN1P58418 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.87■□□□□ 0.29
CLRN1P58418 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.87■□□□□ 0.29
CLRN1P58418 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.87■□□□□ 0.29
CLRN1P58418 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLRN1P58418 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLRN1P58418 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLRN1P58418 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLRN1P58418 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLRN1P58418 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.87■□□□□ 0.29
CLRN1P58418 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.87■□□□□ 0.29
CLRN1P58418 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.86■□□□□ 0.29
CLRN1P58418 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLRN1P58418 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.86■□□□□ 0.29
CLRN1P58418 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLRN1P58418 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLRN1P58418 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLRN1P58418 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLRN1P58418 AL020996.1-203ENST00000536896 2307 ntBASIC16.86■□□□□ 0.29
CLRN1P58418 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLRN1P58418 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.86■□□□□ 0.29
CLRN1P58418 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLRN1P58418 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLRN1P58418 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms