Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.88■□□□□ 0.45
NR1H2P55055 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H2P55055 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NR1H2P55055 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.88■□□□□ 0.45
NR1H2P55055 KRT17P1-201ENST00000399211 1546 ntBASIC17.88■□□□□ 0.45
NR1H2P55055 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NR1H2P55055 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.87■□□□□ 0.45
NR1H2P55055 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.87■□□□□ 0.45
NR1H2P55055 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.87■□□□□ 0.45
NR1H2P55055 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 AC116050.2-201ENST00000612102 1779 ntBASIC17.87■□□□□ 0.45
NR1H2P55055 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NR1H2P55055 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 KRT18P68-201ENST00000392293 1000 ntBASIC17.87■□□□□ 0.45
NR1H2P55055 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.87■□□□□ 0.45
NR1H2P55055 AL355472.2-201ENST00000422958 438 ntBASIC17.87■□□□□ 0.45
NR1H2P55055 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NR1H2P55055 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.87■□□□□ 0.45
NR1H2P55055 AC026366.1-201ENST00000488803 879 ntBASIC17.87■□□□□ 0.45
NR1H2P55055 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.87■□□□□ 0.45
NR1H2P55055 UNC93B5-201ENST00000530315 699 ntBASIC17.87■□□□□ 0.45
NR1H2P55055 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.87■□□□□ 0.45
NR1H2P55055 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NR1H2P55055 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.87■□□□□ 0.45
NR1H2P55055 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NR1H2P55055 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.87■□□□□ 0.45
NR1H2P55055 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.87■□□□□ 0.45
NR1H2P55055 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.87■□□□□ 0.45
NR1H2P55055 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H2P55055 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.86■□□□□ 0.45
NR1H2P55055 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 AC141586.3-201ENST00000562166 1838 ntBASIC17.86■□□□□ 0.45
NR1H2P55055 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
NR1H2P55055 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NR1H2P55055 PRORSD1P-201ENST00000295112 541 ntBASIC17.86■□□□□ 0.45
NR1H2P55055 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.86■□□□□ 0.45
NR1H2P55055 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.86■□□□□ 0.45
NR1H2P55055 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.86■□□□□ 0.45
NR1H2P55055 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.86■□□□□ 0.45
NR1H2P55055 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.86■□□□□ 0.45
NR1H2P55055 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.86■□□□□ 0.45
NR1H2P55055 AP003097.1-201ENST00000530657 1135 ntBASIC17.86■□□□□ 0.45
NR1H2P55055 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.86■□□□□ 0.45
NR1H2P55055 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NR1H2P55055 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.86■□□□□ 0.45
NR1H2P55055 AC060766.5-201ENST00000590539 871 ntBASIC17.86■□□□□ 0.45
NR1H2P55055 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 HLA-B-256ENST00000639848 1089 ntBASIC17.86■□□□□ 0.45
NR1H2P55055 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NR1H2P55055 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.86■□□□□ 0.45
NR1H2P55055 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.86■□□□□ 0.45
NR1H2P55055 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.86■□□□□ 0.45
NR1H2P55055 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.86■□□□□ 0.45
NR1H2P55055 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.86■□□□□ 0.45
NR1H2P55055 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NR1H2P55055 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 AC008764.6-201ENST00000595909 2069 ntBASIC17.86■□□□□ 0.45
NR1H2P55055 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H2P55055 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H2P55055 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H2P55055 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H2P55055 ESPNP-201ENST00000270691 2015 ntBASIC17.85■□□□□ 0.45
NR1H2P55055 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H2P55055 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H2P55055 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms