Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PDE1AP54750 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
PDE1AP54750 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDE1AP54750 RBM17P1-201ENST00000453646 1190 ntBASIC23.08■■□□□ 1.29
PDE1AP54750 SNORA78-201ENST00000459373 127 ntBASIC23.08■■□□□ 1.29
PDE1AP54750 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PDE1AP54750 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDE1AP54750 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDE1AP54750 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDE1AP54750 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDE1AP54750 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDE1AP54750 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDE1AP54750 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PDE1AP54750 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDE1AP54750 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDE1AP54750 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDE1AP54750 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PDE1AP54750 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDE1AP54750 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDE1AP54750 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDE1AP54750 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.07■■□□□ 1.28
PDE1AP54750 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PDE1AP54750 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDE1AP54750 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
PDE1AP54750 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.07■■□□□ 1.28
PDE1AP54750 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDE1AP54750 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDE1AP54750 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.07■■□□□ 1.28
PDE1AP54750 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.07■■□□□ 1.28
PDE1AP54750 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
PDE1AP54750 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDE1AP54750 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDE1AP54750 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDE1AP54750 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PDE1AP54750 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.07■■□□□ 1.28
PDE1AP54750 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PDE1AP54750 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
PDE1AP54750 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PDE1AP54750 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC23.07■■□□□ 1.28
PDE1AP54750 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC23.07■■□□□ 1.28
PDE1AP54750 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PDE1AP54750 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE1AP54750 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
PDE1AP54750 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.06■■□□□ 1.28
PDE1AP54750 AC079598.2-202ENST00000546624 1451 ntBASIC23.06■■□□□ 1.28
PDE1AP54750 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PDE1AP54750 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC23.06■■□□□ 1.28
PDE1AP54750 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
PDE1AP54750 AC104581.1-202ENST00000635932 2618 ntBASIC23.06■■□□□ 1.28
PDE1AP54750 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDE1AP54750 CRYGFP-201ENST00000418459 633 ntBASIC23.06■■□□□ 1.28
PDE1AP54750 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDE1AP54750 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.06■■□□□ 1.28
PDE1AP54750 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.06■■□□□ 1.28
PDE1AP54750 MIR4785-201ENST00000585005 73 ntBASIC23.06■■□□□ 1.28
PDE1AP54750 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.06■■□□□ 1.28
PDE1AP54750 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE1AP54750 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC23.06■■□□□ 1.28
PDE1AP54750 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE1AP54750 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.06■■□□□ 1.28
PDE1AP54750 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.06■■□□□ 1.28
PDE1AP54750 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC23.06■■□□□ 1.28
PDE1AP54750 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.06■■□□□ 1.28
PDE1AP54750 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE1AP54750 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE1AP54750 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE1AP54750 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE1AP54750 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE1AP54750 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE1AP54750 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE1AP54750 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE1AP54750 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE1AP54750 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE1AP54750 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.05■■□□□ 1.28
PDE1AP54750 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.05■■□□□ 1.28
PDE1AP54750 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.05■■□□□ 1.28
PDE1AP54750 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE1AP54750 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.05■■□□□ 1.28
PDE1AP54750 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.05■■□□□ 1.28
PDE1AP54750 AP005242.2-201ENST00000580065 1175 ntBASIC23.05■■□□□ 1.28
PDE1AP54750 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE1AP54750 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC23.05■■□□□ 1.28
PDE1AP54750 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.05■■□□□ 1.28
PDE1AP54750 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDE1AP54750 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.05■■□□□ 1.28
PDE1AP54750 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDE1AP54750 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE1AP54750 AC009113.1-201ENST00000570267 2443 ntBASIC23.04■■□□□ 1.28
PDE1AP54750 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.04■■□□□ 1.28
PDE1AP54750 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE1AP54750 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
PDE1AP54750 RCC2P3-201ENST00000418112 1537 ntBASIC23.04■■□□□ 1.28
PDE1AP54750 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDE1AP54750 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE1AP54750 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE1AP54750 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE1AP54750 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC23.04■■□□□ 1.28
PDE1AP54750 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDE1AP54750 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.04■■□□□ 1.28
PDE1AP54750 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms