Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.69■□□□□ 0.42
SMSP52788 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.69■□□□□ 0.42
SMSP52788 AC113347.1-201ENST00000413321 391 ntBASIC17.69■□□□□ 0.42
SMSP52788 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.69■□□□□ 0.42
SMSP52788 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SMSP52788 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMSP52788 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMSP52788 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMSP52788 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMSP52788 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMSP52788 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMSP52788 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMSP52788 AC079598.2-202ENST00000546624 1451 ntBASIC17.69■□□□□ 0.42
SMSP52788 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMSP52788 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMSP52788 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SMSP52788 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.68■□□□□ 0.42
SMSP52788 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 AC090340.1-201ENST00000620778 4980 ntBASIC17.68■□□□□ 0.42
SMSP52788 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.68■□□□□ 0.42
SMSP52788 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SMSP52788 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.68■□□□□ 0.42
SMSP52788 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.68■□□□□ 0.42
SMSP52788 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 CR392000.1-201ENST00000624770 1228 ntBASIC17.68■□□□□ 0.42
SMSP52788 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.68■□□□□ 0.42
SMSP52788 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SMSP52788 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 AC018553.1-201ENST00000616682 1458 ntBASIC17.68■□□□□ 0.42
SMSP52788 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.68■□□□□ 0.42
SMSP52788 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SMSP52788 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SMSP52788 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 AC141586.3-201ENST00000562166 1838 ntBASIC17.68■□□□□ 0.42
SMSP52788 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMSP52788 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SMSP52788 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.67■□□□□ 0.42
SMSP52788 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.67■□□□□ 0.42
SMSP52788 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SMSP52788 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.67■□□□□ 0.42
SMSP52788 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.67■□□□□ 0.42
SMSP52788 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.67■□□□□ 0.42
SMSP52788 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.67■□□□□ 0.42
SMSP52788 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.67■□□□□ 0.42
SMSP52788 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SMSP52788 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.67■□□□□ 0.42
SMSP52788 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.67■□□□□ 0.42
SMSP52788 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SMSP52788 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SMSP52788 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SMSP52788 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.67■□□□□ 0.42
SMSP52788 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMSP52788 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMSP52788 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.66■□□□□ 0.42
SMSP52788 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
SMSP52788 KRT16P1-201ENST00000399124 1418 ntBASIC17.66■□□□□ 0.42
SMSP52788 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.66■□□□□ 0.42
SMSP52788 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMSP52788 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.66■□□□□ 0.42
SMSP52788 FITM1-202ENST00000559294 800 ntBASIC17.66■□□□□ 0.42
SMSP52788 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.66■□□□□ 0.42
SMSP52788 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.66■□□□□ 0.42
SMSP52788 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SMSP52788 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms