Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLCN2P51788 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN2P51788 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN2P51788 AC011270.2-201ENST00000624293 2550 ntBASIC18.28■□□□□ 0.52
CLCN2P51788 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLCN2P51788 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN2P51788 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CLCN2P51788 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CLCN2P51788 RPS2P55-201ENST00000397318 883 ntBASIC18.28■□□□□ 0.52
CLCN2P51788 AL353807.1-201ENST00000427475 662 ntBASIC18.28■□□□□ 0.52
CLCN2P51788 YBX1P10-201ENST00000444752 975 ntBASIC18.28■□□□□ 0.52
CLCN2P51788 AC107956.1-201ENST00000494359 873 ntBASIC18.28■□□□□ 0.52
CLCN2P51788 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCN2P51788 AC233702.5-201ENST00000584107 538 ntBASIC18.28■□□□□ 0.52
CLCN2P51788 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CLCN2P51788 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN2P51788 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN2P51788 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLCN2P51788 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLCN2P51788 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLCN2P51788 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN2P51788 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN2P51788 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN2P51788 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.28■□□□□ 0.52
CLCN2P51788 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN2P51788 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN2P51788 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN2P51788 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN2P51788 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN2P51788 SIRPAP1-201ENST00000448467 1770 ntBASIC18.27■□□□□ 0.52
CLCN2P51788 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN2P51788 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLCN2P51788 HTR7P1-201ENST00000538670 1336 ntBASIC18.27■□□□□ 0.52
CLCN2P51788 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN2P51788 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCN2P51788 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN2P51788 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN2P51788 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCN2P51788 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN2P51788 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN2P51788 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN2P51788 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLCN2P51788 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.27■□□□□ 0.52
CLCN2P51788 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.27■□□□□ 0.52
CLCN2P51788 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCN2P51788 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN2P51788 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN2P51788 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLCN2P51788 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLCN2P51788 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.27■□□□□ 0.52
CLCN2P51788 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN2P51788 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCN2P51788 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN2P51788 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.27■□□□□ 0.51
CLCN2P51788 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCN2P51788 AC141586.5-201ENST00000624546 2050 ntBASIC18.27■□□□□ 0.51
CLCN2P51788 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.51
CLCN2P51788 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCN2P51788 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLCN2P51788 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.27■□□□□ 0.51
CLCN2P51788 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CLCN2P51788 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCN2P51788 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCN2P51788 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLCN2P51788 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCN2P51788 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCN2P51788 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLCN2P51788 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCN2P51788 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCN2P51788 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCN2P51788 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCN2P51788 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCN2P51788 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCN2P51788 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCN2P51788 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCN2P51788 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLCN2P51788 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN2P51788 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms