Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A3P43003 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A3P43003 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC1A3P43003 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 AC138932.1-201ENST00000534164 6830 ntBASIC17.39■□□□□ 0.37
SLC1A3P43003 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A3P43003 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A3P43003 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SLC1A3P43003 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC1A3P43003 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A3P43003 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A3P43003 AC079598.2-202ENST00000546624 1451 ntBASIC17.38■□□□□ 0.37
SLC1A3P43003 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A3P43003 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A3P43003 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A3P43003 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC1A3P43003 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A3P43003 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A3P43003 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC1A3P43003 UBE2SP1-201ENST00000450587 669 ntBASIC17.38■□□□□ 0.37
SLC1A3P43003 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A3P43003 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.38■□□□□ 0.37
SLC1A3P43003 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC1A3P43003 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC1A3P43003 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC1A3P43003 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SLC1A3P43003 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
SLC1A3P43003 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A3P43003 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A3P43003 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC1A3P43003 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC1A3P43003 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A3P43003 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SLC1A3P43003 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC1A3P43003 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A3P43003 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A3P43003 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC1A3P43003 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC1A3P43003 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A3P43003 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC1A3P43003 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC1A3P43003 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLC1A3P43003 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SLC1A3P43003 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC1A3P43003 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLC1A3P43003 TSPY23P-201ENST00000440136 739 ntBASIC17.37■□□□□ 0.37
SLC1A3P43003 AL158047.1-201ENST00000445918 881 ntBASIC17.37■□□□□ 0.37
SLC1A3P43003 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 AC026271.3-201ENST00000571884 352 ntBASIC17.37■□□□□ 0.37
SLC1A3P43003 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC1A3P43003 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.37■□□□□ 0.37
SLC1A3P43003 CR392000.1-201ENST00000624770 1228 ntBASIC17.37■□□□□ 0.37
SLC1A3P43003 AL031985.4-201ENST00000642138 673 ntBASIC17.37■□□□□ 0.37
SLC1A3P43003 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SLC1A3P43003 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC1A3P43003 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SLC1A3P43003 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC1A3P43003 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.37■□□□□ 0.37
SLC1A3P43003 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SLC1A3P43003 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SLC1A3P43003 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC1A3P43003 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A3P43003 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A3P43003 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC1A3P43003 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A3P43003 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A3P43003 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC1A3P43003 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A3P43003 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A3P43003 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A3P43003 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A3P43003 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC1A3P43003 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.36■□□□□ 0.37
SLC1A3P43003 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC1A3P43003 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A3P43003 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A3P43003 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A3P43003 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A3P43003 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC1A3P43003 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A3P43003 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms