Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.01■□□□□ 0.63
CCNFP41002 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNFP41002 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCNFP41002 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCNFP41002 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.01■□□□□ 0.63
CCNFP41002 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CCNFP41002 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCNFP41002 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.01■□□□□ 0.63
CCNFP41002 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.01■□□□□ 0.63
CCNFP41002 FAM197Y4-202ENST00000622692 608 ntBASIC19.01■□□□□ 0.63
CCNFP41002 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.01■□□□□ 0.63
CCNFP41002 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCNFP41002 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNFP41002 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNFP41002 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CCNFP41002 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCNFP41002 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.01■□□□□ 0.63
CCNFP41002 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNFP41002 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CCNFP41002 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCNFP41002 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNFP41002 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNFP41002 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CCNFP41002 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19■□□□□ 0.63
CCNFP41002 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCNFP41002 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCNFP41002 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCNFP41002 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19■□□□□ 0.63
CCNFP41002 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19■□□□□ 0.63
CCNFP41002 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19■□□□□ 0.63
CCNFP41002 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19■□□□□ 0.63
CCNFP41002 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNFP41002 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNFP41002 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCNFP41002 AL359736.2-201ENST00000621992 437 ntBASIC19■□□□□ 0.63
CCNFP41002 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19■□□□□ 0.63
CCNFP41002 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19■□□□□ 0.63
CCNFP41002 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19■□□□□ 0.63
CCNFP41002 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCNFP41002 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19■□□□□ 0.63
CCNFP41002 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNFP41002 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCNFP41002 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19■□□□□ 0.63
CCNFP41002 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCNFP41002 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19■□□□□ 0.63
CCNFP41002 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNFP41002 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNFP41002 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCNFP41002 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19■□□□□ 0.63
CCNFP41002 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.99■□□□□ 0.63
CCNFP41002 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNFP41002 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNFP41002 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CCNFP41002 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNFP41002 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNFP41002 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNFP41002 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNFP41002 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNFP41002 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.99■□□□□ 0.63
CCNFP41002 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.99■□□□□ 0.63
CCNFP41002 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCNFP41002 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.99■□□□□ 0.63
CCNFP41002 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNFP41002 AC142381.4-202ENST00000563973 229 ntBASIC18.99■□□□□ 0.63
CCNFP41002 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.99■□□□□ 0.63
CCNFP41002 TMEM191A-211ENST00000637163 1067 ntBASIC18.99■□□□□ 0.63
CCNFP41002 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNFP41002 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNFP41002 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNFP41002 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNFP41002 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.99■□□□□ 0.63
CCNFP41002 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.98■□□□□ 0.63
CCNFP41002 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCNFP41002 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.98■□□□□ 0.63
CCNFP41002 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCNFP41002 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.98■□□□□ 0.63
CCNFP41002 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.98■□□□□ 0.63
CCNFP41002 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.98■□□□□ 0.63
CCNFP41002 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.98■□□□□ 0.63
CCNFP41002 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CCNFP41002 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 C1QL1P1-201ENST00000568105 661 ntBASIC18.98■□□□□ 0.63
CCNFP41002 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.98■□□□□ 0.63
CCNFP41002 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.98■□□□□ 0.63
CCNFP41002 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCNFP41002 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms