Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19■□□□□ 0.63
MDH1P40925 AC131212.1-201ENST00000613771 668 ntBASIC19■□□□□ 0.63
MDH1P40925 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19■□□□□ 0.63
MDH1P40925 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19■□□□□ 0.63
MDH1P40925 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19■□□□□ 0.63
MDH1P40925 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19■□□□□ 0.63
MDH1P40925 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19■□□□□ 0.63
MDH1P40925 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19■□□□□ 0.63
MDH1P40925 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
MDH1P40925 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19■□□□□ 0.63
MDH1P40925 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.99■□□□□ 0.63
MDH1P40925 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.99■□□□□ 0.63
MDH1P40925 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MDH1P40925 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MDH1P40925 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MDH1P40925 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MDH1P40925 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
MDH1P40925 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MDH1P40925 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.99■□□□□ 0.63
MDH1P40925 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.99■□□□□ 0.63
MDH1P40925 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MDH1P40925 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MDH1P40925 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.99■□□□□ 0.63
MDH1P40925 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.99■□□□□ 0.63
MDH1P40925 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MDH1P40925 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MDH1P40925 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MDH1P40925 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MDH1P40925 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MDH1P40925 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.99■□□□□ 0.63
MDH1P40925 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.99■□□□□ 0.63
MDH1P40925 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
MDH1P40925 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
MDH1P40925 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MDH1P40925 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
MDH1P40925 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MDH1P40925 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MDH1P40925 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
MDH1P40925 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
MDH1P40925 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
MDH1P40925 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 KRT18P68-201ENST00000392293 1000 ntBASIC18.98■□□□□ 0.63
MDH1P40925 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.98■□□□□ 0.63
MDH1P40925 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.98■□□□□ 0.63
MDH1P40925 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.98■□□□□ 0.63
MDH1P40925 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
MDH1P40925 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.98■□□□□ 0.63
MDH1P40925 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MDH1P40925 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.98■□□□□ 0.63
MDH1P40925 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
MDH1P40925 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MDH1P40925 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MDH1P40925 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.98■□□□□ 0.63
MDH1P40925 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MDH1P40925 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.97■□□□□ 0.63
MDH1P40925 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
MDH1P40925 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MDH1P40925 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MDH1P40925 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MDH1P40925 LINC02228-203ENST00000641970 1355 ntBASIC18.97■□□□□ 0.63
MDH1P40925 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.97■□□□□ 0.63
MDH1P40925 AD000864.1-201ENST00000624076 2295 ntBASIC18.97■□□□□ 0.63
MDH1P40925 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MDH1P40925 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MDH1P40925 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.97■□□□□ 0.63
MDH1P40925 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
MDH1P40925 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
MDH1P40925 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.97■□□□□ 0.63
MDH1P40925 TERF1P5-201ENST00000477545 1207 ntBASIC18.97■□□□□ 0.63
MDH1P40925 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MDH1P40925 AL136967.2-201ENST00000623968 743 ntBASIC18.97■□□□□ 0.63
MDH1P40925 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MDH1P40925 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.97■□□□□ 0.63
MDH1P40925 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MDH1P40925 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MDH1P40925 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MDH1P40925 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MDH1P40925 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms