Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
COL15A1P39059 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL15A1P39059 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL15A1P39059 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL15A1P39059 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL15A1P39059 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL15A1P39059 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL15A1P39059 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.97■■□□□ 1.43
COL15A1P39059 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.97■■□□□ 1.43
COL15A1P39059 KRT8P3-201ENST00000519669 1449 ntBASIC23.97■■□□□ 1.43
COL15A1P39059 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL15A1P39059 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.97■■□□□ 1.43
COL15A1P39059 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL15A1P39059 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL15A1P39059 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL15A1P39059 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.96■■□□□ 1.43
COL15A1P39059 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL15A1P39059 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.96■■□□□ 1.43
COL15A1P39059 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL15A1P39059 MIR3917-201ENST00000580971 93 ntBASIC23.96■■□□□ 1.43
COL15A1P39059 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
COL15A1P39059 IFNL4P1-201ENST00000607083 540 ntBASIC23.96■■□□□ 1.43
COL15A1P39059 Z82202.1-201ENST00000623446 1880 ntBASIC23.96■■□□□ 1.43
COL15A1P39059 AC112497.1-201ENST00000624824 639 ntBASIC23.96■■□□□ 1.43
COL15A1P39059 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL15A1P39059 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL15A1P39059 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL15A1P39059 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL15A1P39059 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.96■■□□□ 1.43
COL15A1P39059 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23.96■■□□□ 1.43
COL15A1P39059 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
COL15A1P39059 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC23.95■■□□□ 1.43
COL15A1P39059 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
COL15A1P39059 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL15A1P39059 PVRIG2P-201ENST00000435460 978 ntBASIC23.95■■□□□ 1.42
COL15A1P39059 KRT17P6-201ENST00000453795 1220 ntBASIC23.95■■□□□ 1.42
COL15A1P39059 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.95■■□□□ 1.42
COL15A1P39059 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL15A1P39059 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
COL15A1P39059 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
COL15A1P39059 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC23.95■■□□□ 1.42
COL15A1P39059 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.95■■□□□ 1.42
COL15A1P39059 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC23.95■■□□□ 1.42
COL15A1P39059 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.95■■□□□ 1.42
COL15A1P39059 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL15A1P39059 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.95■■□□□ 1.42
COL15A1P39059 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.95■■□□□ 1.42
COL15A1P39059 AL391807.1-203ENST00000604392 2365 ntBASIC23.95■■□□□ 1.42
COL15A1P39059 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.95■■□□□ 1.42
COL15A1P39059 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL15A1P39059 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL15A1P39059 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
COL15A1P39059 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.95■■□□□ 1.42
COL15A1P39059 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL15A1P39059 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL15A1P39059 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL15A1P39059 KRT8P10-201ENST00000450021 1447 ntBASIC23.94■■□□□ 1.42
COL15A1P39059 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL15A1P39059 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
COL15A1P39059 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL15A1P39059 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL15A1P39059 FAAHP1-202ENST00000446499 1238 ntBASIC23.94■■□□□ 1.42
COL15A1P39059 TPSP2-201ENST00000561760 610 ntBASIC23.94■■□□□ 1.42
COL15A1P39059 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL15A1P39059 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL15A1P39059 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL15A1P39059 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL15A1P39059 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.94■■□□□ 1.42
COL15A1P39059 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.94■■□□□ 1.42
COL15A1P39059 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL15A1P39059 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.93■■□□□ 1.42
COL15A1P39059 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL15A1P39059 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.93■■□□□ 1.42
COL15A1P39059 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL15A1P39059 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL15A1P39059 MIR662-201ENST00000384847 95 ntBASIC23.93■■□□□ 1.42
COL15A1P39059 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC23.93■■□□□ 1.42
COL15A1P39059 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.93■■□□□ 1.42
COL15A1P39059 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC23.93■■□□□ 1.42
COL15A1P39059 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL15A1P39059 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
COL15A1P39059 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL15A1P39059 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
COL15A1P39059 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL15A1P39059 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL15A1P39059 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.93■■□□□ 1.42
COL15A1P39059 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL15A1P39059 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL15A1P39059 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.92■■□□□ 1.42
COL15A1P39059 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL15A1P39059 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL15A1P39059 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.92■■□□□ 1.42
COL15A1P39059 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
COL15A1P39059 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23.92■■□□□ 1.42
COL15A1P39059 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC23.92■■□□□ 1.42
COL15A1P39059 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.92■■□□□ 1.42
COL15A1P39059 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
COL15A1P39059 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL15A1P39059 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC23.92■■□□□ 1.42
COL15A1P39059 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms