Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.96■□□□□ 0.15
COL8A2P25067 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.96■□□□□ 0.15
COL8A2P25067 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.96■□□□□ 0.15
COL8A2P25067 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.96■□□□□ 0.15
COL8A2P25067 AC087388.1-201ENST00000571370 1112 ntBASIC15.96■□□□□ 0.15
COL8A2P25067 MIR4674-201ENST00000582457 87 ntBASIC15.96■□□□□ 0.15
COL8A2P25067 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.96■□□□□ 0.15
COL8A2P25067 AL023973.1-201ENST00000624619 620 ntBASIC15.96■□□□□ 0.15
COL8A2P25067 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.96■□□□□ 0.15
COL8A2P25067 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL8A2P25067 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
COL8A2P25067 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.96■□□□□ 0.15
COL8A2P25067 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
COL8A2P25067 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
COL8A2P25067 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
COL8A2P25067 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
COL8A2P25067 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
COL8A2P25067 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.96■□□□□ 0.14
COL8A2P25067 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.96■□□□□ 0.14
COL8A2P25067 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL8A2P25067 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL8A2P25067 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL8A2P25067 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL8A2P25067 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL8A2P25067 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.95■□□□□ 0.14
COL8A2P25067 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
COL8A2P25067 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL8A2P25067 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
COL8A2P25067 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
COL8A2P25067 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL8A2P25067 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL8A2P25067 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.95■□□□□ 0.14
COL8A2P25067 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
COL8A2P25067 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.95■□□□□ 0.14
COL8A2P25067 AC022616.7-201ENST00000525383 220 ntBASIC15.95■□□□□ 0.14
COL8A2P25067 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.95■□□□□ 0.14
COL8A2P25067 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.95■□□□□ 0.14
COL8A2P25067 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.95■□□□□ 0.14
COL8A2P25067 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
COL8A2P25067 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL8A2P25067 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
COL8A2P25067 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL8A2P25067 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
COL8A2P25067 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL8A2P25067 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.95■□□□□ 0.14
COL8A2P25067 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.95■□□□□ 0.14
COL8A2P25067 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.95■□□□□ 0.14
COL8A2P25067 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
COL8A2P25067 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL8A2P25067 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
COL8A2P25067 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL8A2P25067 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
COL8A2P25067 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL8A2P25067 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL8A2P25067 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
COL8A2P25067 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.94■□□□□ 0.14
COL8A2P25067 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL8A2P25067 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
COL8A2P25067 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL8A2P25067 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.94■□□□□ 0.14
COL8A2P25067 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.94■□□□□ 0.14
COL8A2P25067 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL8A2P25067 AL031432.5-201ENST00000641059 760 ntBASIC15.94■□□□□ 0.14
COL8A2P25067 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.94■□□□□ 0.14
COL8A2P25067 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL8A2P25067 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL8A2P25067 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL8A2P25067 TEX21P-204ENST00000641479 1693 ntBASIC15.94■□□□□ 0.14
COL8A2P25067 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL8A2P25067 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
COL8A2P25067 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.94■□□□□ 0.14
COL8A2P25067 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.94■□□□□ 0.14
COL8A2P25067 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
COL8A2P25067 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.94■□□□□ 0.14
COL8A2P25067 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL8A2P25067 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL8A2P25067 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL8A2P25067 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL8A2P25067 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL8A2P25067 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL8A2P25067 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
COL8A2P25067 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL8A2P25067 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL8A2P25067 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL8A2P25067 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL8A2P25067 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.93■□□□□ 0.14
COL8A2P25067 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.93■□□□□ 0.14
COL8A2P25067 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL8A2P25067 AC009947.2-201ENST00000444014 672 ntBASIC15.93■□□□□ 0.14
COL8A2P25067 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL8A2P25067 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.93■□□□□ 0.14
COL8A2P25067 AL441883.1-201ENST00000566170 1045 ntBASIC15.93■□□□□ 0.14
COL8A2P25067 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL8A2P25067 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.93■□□□□ 0.14
COL8A2P25067 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL8A2P25067 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
COL8A2P25067 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL8A2P25067 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL8A2P25067 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL8A2P25067 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms