Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP11P24347 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP11P24347 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP11P24347 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP11P24347 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP11P24347 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP11P24347 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP11P24347 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP11P24347 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP11P24347 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.93■□□□□ 0.46
MMP11P24347 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MMP11P24347 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP11P24347 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MMP11P24347 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
MMP11P24347 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.93■□□□□ 0.46
MMP11P24347 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP11P24347 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
MMP11P24347 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
MMP11P24347 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.93■□□□□ 0.46
MMP11P24347 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP11P24347 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.93■□□□□ 0.46
MMP11P24347 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
MMP11P24347 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP11P24347 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP11P24347 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MMP11P24347 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.93■□□□□ 0.46
MMP11P24347 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP11P24347 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MMP11P24347 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP11P24347 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.92■□□□□ 0.46
MMP11P24347 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.92■□□□□ 0.46
MMP11P24347 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
MMP11P24347 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.92■□□□□ 0.46
MMP11P24347 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
MMP11P24347 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.92■□□□□ 0.46
MMP11P24347 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.92■□□□□ 0.46
MMP11P24347 AL512604.3-201ENST00000569583 964 ntBASIC17.92■□□□□ 0.46
MMP11P24347 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.92■□□□□ 0.46
MMP11P24347 AL138966.2-201ENST00000621997 464 ntBASIC17.92■□□□□ 0.46
MMP11P24347 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
MMP11P24347 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
MMP11P24347 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 AC120498.9-201ENST00000339021 3867 ntBASIC17.92■□□□□ 0.46
MMP11P24347 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
MMP11P24347 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP11P24347 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MMP11P24347 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.91■□□□□ 0.46
MMP11P24347 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MMP11P24347 KRT8P11-201ENST00000409686 1436 ntBASIC17.91■□□□□ 0.46
MMP11P24347 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
MMP11P24347 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MMP11P24347 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MMP11P24347 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
MMP11P24347 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MMP11P24347 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.91■□□□□ 0.46
MMP11P24347 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.91■□□□□ 0.46
MMP11P24347 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.91■□□□□ 0.46
MMP11P24347 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.91■□□□□ 0.46
MMP11P24347 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
MMP11P24347 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MMP11P24347 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MMP11P24347 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MMP11P24347 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.91■□□□□ 0.46
MMP11P24347 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MMP11P24347 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
MMP11P24347 AC104417.2-201ENST00000562989 1793 ntBASIC17.91■□□□□ 0.46
MMP11P24347 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
MMP11P24347 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MMP11P24347 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.91■□□□□ 0.46
MMP11P24347 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
MMP11P24347 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.91■□□□□ 0.46
MMP11P24347 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MMP11P24347 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MMP11P24347 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.9■□□□□ 0.46
MMP11P24347 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
MMP11P24347 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MMP11P24347 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms