Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL1P22362 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
CCL1P22362 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
CCL1P22362 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL1P22362 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL1P22362 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL1P22362 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL1P22362 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCL1P22362 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCL1P22362 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL1P22362 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCL1P22362 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.28■□□□□ 0.2
CCL1P22362 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL1P22362 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL1P22362 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCL1P22362 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL1P22362 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.27■□□□□ 0.2
CCL1P22362 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL1P22362 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL1P22362 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL1P22362 AC004951.3-201ENST00000418645 1148 ntBASIC16.27■□□□□ 0.2
CCL1P22362 RPS2P4-201ENST00000476944 856 ntBASIC16.27■□□□□ 0.2
CCL1P22362 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.27■□□□□ 0.2
CCL1P22362 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.27■□□□□ 0.2
CCL1P22362 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.27■□□□□ 0.2
CCL1P22362 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL1P22362 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL1P22362 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.27■□□□□ 0.2
CCL1P22362 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.27■□□□□ 0.2
CCL1P22362 AC006058.3-201ENST00000606217 1069 ntBASIC16.27■□□□□ 0.2
CCL1P22362 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCL1P22362 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.27■□□□□ 0.2
CCL1P22362 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL1P22362 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCL1P22362 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL1P22362 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL1P22362 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL1P22362 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CCL1P22362 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL1P22362 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.27■□□□□ 0.19
CCL1P22362 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL1P22362 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CCL1P22362 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL1P22362 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL1P22362 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.27■□□□□ 0.19
CCL1P22362 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CCL1P22362 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCL1P22362 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL1P22362 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL1P22362 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCL1P22362 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.26■□□□□ 0.19
CCL1P22362 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL1P22362 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
CCL1P22362 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CCL1P22362 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCL1P22362 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.26■□□□□ 0.19
CCL1P22362 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL1P22362 MYC-208ENST00000641036 567 ntBASIC16.26■□□□□ 0.19
CCL1P22362 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 KRT16P1-201ENST00000399124 1418 ntBASIC16.26■□□□□ 0.19
CCL1P22362 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL1P22362 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL1P22362 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCL1P22362 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCL1P22362 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL1P22362 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL1P22362 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL1P22362 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL1P22362 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCL1P22362 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL1P22362 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms