Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 KRT8P10-201ENST00000450021 1447 ntBASIC21.49■■□□□ 1.03
COL11A1P12107 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A1P12107 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A1P12107 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.49■■□□□ 1.03
COL11A1P12107 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.49■■□□□ 1.03
COL11A1P12107 AC111152.3-201ENST00000569699 673 ntBASIC21.49■■□□□ 1.03
COL11A1P12107 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.49■■□□□ 1.03
COL11A1P12107 MIR3652-201ENST00000579335 131 ntBASIC21.49■■□□□ 1.03
COL11A1P12107 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.49■■□□□ 1.03
COL11A1P12107 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.49■■□□□ 1.03
COL11A1P12107 AC112497.1-201ENST00000624824 639 ntBASIC21.49■■□□□ 1.03
COL11A1P12107 AL109659.2-201ENST00000606809 1674 ntBASIC21.49■■□□□ 1.03
COL11A1P12107 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.49■■□□□ 1.03
COL11A1P12107 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.49■■□□□ 1.03
COL11A1P12107 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.49■■□□□ 1.03
COL11A1P12107 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A1P12107 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
COL11A1P12107 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A1P12107 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
COL11A1P12107 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.49■■□□□ 1.03
COL11A1P12107 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.49■■□□□ 1.03
COL11A1P12107 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A1P12107 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.48■■□□□ 1.03
COL11A1P12107 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.48■■□□□ 1.03
COL11A1P12107 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.48■■□□□ 1.03
COL11A1P12107 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
COL11A1P12107 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.48■■□□□ 1.03
COL11A1P12107 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
COL11A1P12107 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.48■■□□□ 1.03
COL11A1P12107 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 GPR32P1-201ENST00000601788 811 ntBASIC21.48■■□□□ 1.03
COL11A1P12107 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
COL11A1P12107 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
COL11A1P12107 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 PCDHAC2-203ENST00000615316 3011 ntBASIC21.48■■□□□ 1.03
COL11A1P12107 IRX1P1-201ENST00000438849 1838 ntBASIC21.48■■□□□ 1.03
COL11A1P12107 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.48■■□□□ 1.03
COL11A1P12107 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.48■■□□□ 1.03
COL11A1P12107 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
COL11A1P12107 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.48■■□□□ 1.03
COL11A1P12107 TPM4P1-201ENST00000436100 807 ntBASIC21.48■■□□□ 1.03
COL11A1P12107 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.48■■□□□ 1.03
COL11A1P12107 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A1P12107 PRELID1P1-202ENST00000567272 903 ntBASIC21.48■■□□□ 1.03
COL11A1P12107 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.48■■□□□ 1.03
COL11A1P12107 AC092119.3-201ENST00000612618 583 ntBASIC21.48■■□□□ 1.03
COL11A1P12107 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL11A1P12107 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
COL11A1P12107 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
COL11A1P12107 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL11A1P12107 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.47■■□□□ 1.03
COL11A1P12107 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL11A1P12107 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL11A1P12107 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.47■■□□□ 1.03
COL11A1P12107 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
COL11A1P12107 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL11A1P12107 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL11A1P12107 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL11A1P12107 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL11A1P12107 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
COL11A1P12107 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.47■■□□□ 1.03
COL11A1P12107 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL11A1P12107 AC092329.2-201ENST00000598402 547 ntBASIC21.47■■□□□ 1.03
COL11A1P12107 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.47■■□□□ 1.03
COL11A1P12107 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
COL11A1P12107 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
COL11A1P12107 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.47■■□□□ 1.03
COL11A1P12107 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.47■■□□□ 1.03
COL11A1P12107 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
COL11A1P12107 AC141586.3-201ENST00000562166 1838 ntBASIC21.47■■□□□ 1.03
COL11A1P12107 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A1P12107 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
COL11A1P12107 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A1P12107 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
COL11A1P12107 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
COL11A1P12107 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A1P12107 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A1P12107 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A1P12107 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A1P12107 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.46■■□□□ 1.03
COL11A1P12107 KRT8P26-201ENST00000534154 1276 ntBASIC21.46■■□□□ 1.03
COL11A1P12107 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A1P12107 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms