Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.26■□□□□ 0.35
HTR1AP08908 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HTR1AP08908 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1AP08908 SIRPAP1-201ENST00000448467 1770 ntBASIC17.25■□□□□ 0.35
HTR1AP08908 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1AP08908 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1AP08908 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1AP08908 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1AP08908 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1AP08908 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1AP08908 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HTR1AP08908 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1AP08908 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
HTR1AP08908 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1AP08908 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HTR1AP08908 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1AP08908 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.25■□□□□ 0.35
HTR1AP08908 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.25■□□□□ 0.35
HTR1AP08908 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HTR1AP08908 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1AP08908 AC008694.1-202ENST00000636953 945 ntBASIC17.25■□□□□ 0.35
HTR1AP08908 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.25■□□□□ 0.35
HTR1AP08908 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1AP08908 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HTR1AP08908 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.24■□□□□ 0.35
HTR1AP08908 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.24■□□□□ 0.35
HTR1AP08908 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.24■□□□□ 0.35
HTR1AP08908 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.24■□□□□ 0.35
HTR1AP08908 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.24■□□□□ 0.35
HTR1AP08908 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.24■□□□□ 0.35
HTR1AP08908 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.24■□□□□ 0.35
HTR1AP08908 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.24■□□□□ 0.35
HTR1AP08908 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HTR1AP08908 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HTR1AP08908 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1AP08908 AL645608.8-201ENST00000606034 2086 ntBASIC17.24■□□□□ 0.35
HTR1AP08908 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.24■□□□□ 0.35
HTR1AP08908 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HTR1AP08908 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HTR1AP08908 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HTR1AP08908 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.23■□□□□ 0.35
HTR1AP08908 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HTR1AP08908 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.23■□□□□ 0.35
HTR1AP08908 AC016769.1-201ENST00000409132 1010 ntBASIC17.23■□□□□ 0.35
HTR1AP08908 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HTR1AP08908 AL355472.2-201ENST00000422958 438 ntBASIC17.23■□□□□ 0.35
HTR1AP08908 CNN2P6-201ENST00000439038 900 ntBASIC17.23■□□□□ 0.35
HTR1AP08908 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.23■□□□□ 0.35
HTR1AP08908 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.23■□□□□ 0.35
HTR1AP08908 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.23■□□□□ 0.35
HTR1AP08908 AL589743.5-201ENST00000616611 1050 ntBASIC17.23■□□□□ 0.35
HTR1AP08908 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.23■□□□□ 0.35
HTR1AP08908 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1AP08908 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HTR1AP08908 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms