Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
GYPBP06028 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
GYPBP06028 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.98■□□□□ 0.31
GYPBP06028 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
GYPBP06028 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.98■□□□□ 0.31
GYPBP06028 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GYPBP06028 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GYPBP06028 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
GYPBP06028 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.98■□□□□ 0.31
GYPBP06028 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GYPBP06028 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GYPBP06028 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GYPBP06028 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.98■□□□□ 0.31
GYPBP06028 AC142086.2-201ENST00000569753 217 ntBASIC16.98■□□□□ 0.31
GYPBP06028 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GYPBP06028 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GYPBP06028 HLA-A-209ENST00000638375 975 ntBASIC16.98■□□□□ 0.31
GYPBP06028 AC083906.6-201ENST00000641366 219 ntBASIC16.98■□□□□ 0.31
GYPBP06028 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GYPBP06028 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.98■□□□□ 0.31
GYPBP06028 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GYPBP06028 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.98■□□□□ 0.31
GYPBP06028 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.98■□□□□ 0.31
GYPBP06028 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GYPBP06028 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GYPBP06028 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GYPBP06028 NBPF21P-201ENST00000425093 1451 ntBASIC16.98■□□□□ 0.31
GYPBP06028 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
GYPBP06028 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.97■□□□□ 0.31
GYPBP06028 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GYPBP06028 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.97■□□□□ 0.31
GYPBP06028 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GYPBP06028 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.97■□□□□ 0.31
GYPBP06028 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.97■□□□□ 0.31
GYPBP06028 AL160286.2-201ENST00000567150 934 ntBASIC16.97■□□□□ 0.31
GYPBP06028 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.97■□□□□ 0.31
GYPBP06028 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.97■□□□□ 0.31
GYPBP06028 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.97■□□□□ 0.31
GYPBP06028 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.97■□□□□ 0.31
GYPBP06028 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
GYPBP06028 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.97■□□□□ 0.31
GYPBP06028 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.97■□□□□ 0.31
GYPBP06028 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.97■□□□□ 0.31
GYPBP06028 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
GYPBP06028 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.97■□□□□ 0.31
GYPBP06028 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
GYPBP06028 BICD1-207ENST00000551848 1962 ntBASIC16.97■□□□□ 0.31
GYPBP06028 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GYPBP06028 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GYPBP06028 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
GYPBP06028 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GYPBP06028 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.96■□□□□ 0.31
GYPBP06028 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
GYPBP06028 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
GYPBP06028 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
GYPBP06028 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GYPBP06028 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GYPBP06028 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.96■□□□□ 0.31
GYPBP06028 TSPY23P-201ENST00000440136 739 ntBASIC16.96■□□□□ 0.31
GYPBP06028 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GYPBP06028 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.96■□□□□ 0.31
GYPBP06028 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.96■□□□□ 0.31
GYPBP06028 UNC93B5-201ENST00000530315 699 ntBASIC16.96■□□□□ 0.31
GYPBP06028 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.96■□□□□ 0.31
GYPBP06028 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.96■□□□□ 0.31
GYPBP06028 AC092666.2-201ENST00000613287 246 ntBASIC16.96■□□□□ 0.31
GYPBP06028 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GYPBP06028 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
GYPBP06028 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.96■□□□□ 0.31
GYPBP06028 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GYPBP06028 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
GYPBP06028 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GYPBP06028 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GYPBP06028 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
GYPBP06028 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GYPBP06028 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.96■□□□□ 0.3
GYPBP06028 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms