Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC093525.10-201ENST00000625130 1569 ntBASIC19.17■□□□□ 0.66
HLA-DQB2P05538 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 HEIH-201ENST00000623091 1652 ntBASIC19.17■□□□□ 0.66
HLA-DQB2P05538 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB2P05538 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 AC068587.9-201ENST00000641814 219 ntBASIC19.16■□□□□ 0.66
HLA-DQB2P05538 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 AL031598.1-201ENST00000561511 1773 ntBASIC19.16■□□□□ 0.66
HLA-DQB2P05538 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 KRT8P9-201ENST00000558927 1449 ntBASIC19.16■□□□□ 0.66
HLA-DQB2P05538 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DQB2P05538 AL020996.1-203ENST00000536896 2307 ntBASIC19.16■□□□□ 0.66
HLA-DQB2P05538 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 CA15P1-201ENST00000481698 905 ntBASIC19.15■□□□□ 0.66
HLA-DQB2P05538 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB2P05538 RCC2P3-201ENST00000418112 1537 ntBASIC19.15■□□□□ 0.66
HLA-DQB2P05538 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.14■□□□□ 0.66
HLA-DQB2P05538 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DQB2P05538 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 MTMR9LP-203ENST00000426597 1545 ntBASIC19.14■□□□□ 0.65
HLA-DQB2P05538 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB2P05538 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.13■□□□□ 0.65
HLA-DQB2P05538 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQB2P05538 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms