Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
POLR3DP05423 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
POLR3DP05423 AC063952.2-201ENST00000498792 1227 ntBASIC22.56■■□□□ 1.2
POLR3DP05423 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.56■■□□□ 1.2
POLR3DP05423 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.56■■□□□ 1.2
POLR3DP05423 AC022616.7-201ENST00000525383 220 ntBASIC22.56■■□□□ 1.2
POLR3DP05423 LTBR-211ENST00000543190 785 ntTSL 3 BASIC22.56■■□□□ 1.2
POLR3DP05423 AC087388.1-201ENST00000571370 1112 ntBASIC22.56■■□□□ 1.2
POLR3DP05423 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.56■■□□□ 1.2
POLR3DP05423 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC22.56■■□□□ 1.2
POLR3DP05423 AC140113.3-201ENST00000605663 199 ntBASIC22.56■■□□□ 1.2
POLR3DP05423 AC008622.2-201ENST00000617006 1229 ntBASIC22.56■■□□□ 1.2
POLR3DP05423 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
POLR3DP05423 AC011558.1-201ENST00000623459 338 ntBASIC22.56■■□□□ 1.2
POLR3DP05423 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.56■■□□□ 1.2
POLR3DP05423 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
POLR3DP05423 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
POLR3DP05423 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
POLR3DP05423 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
POLR3DP05423 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
POLR3DP05423 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC22.55■■□□□ 1.2
POLR3DP05423 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
POLR3DP05423 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
POLR3DP05423 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.55■■□□□ 1.2
POLR3DP05423 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
POLR3DP05423 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
POLR3DP05423 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
POLR3DP05423 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
POLR3DP05423 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.55■■□□□ 1.2
POLR3DP05423 TSPY5P-201ENST00000426936 936 ntBASIC22.55■■□□□ 1.2
POLR3DP05423 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.55■■□□□ 1.2
POLR3DP05423 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.55■■□□□ 1.2
POLR3DP05423 LINC01238-205ENST00000567549 1107 ntBASIC22.55■■□□□ 1.2
POLR3DP05423 MIR4674-201ENST00000582457 87 ntBASIC22.55■■□□□ 1.2
POLR3DP05423 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
POLR3DP05423 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
POLR3DP05423 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
POLR3DP05423 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
POLR3DP05423 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.55■■□□□ 1.2
POLR3DP05423 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
POLR3DP05423 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR3DP05423 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
POLR3DP05423 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR3DP05423 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR3DP05423 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
POLR3DP05423 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR3DP05423 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR3DP05423 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.54■■□□□ 1.2
POLR3DP05423 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR3DP05423 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
POLR3DP05423 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
POLR3DP05423 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.54■■□□□ 1.2
POLR3DP05423 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
POLR3DP05423 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.54■■□□□ 1.2
POLR3DP05423 AL023973.1-201ENST00000624619 620 ntBASIC22.54■■□□□ 1.2
POLR3DP05423 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
POLR3DP05423 AL031432.5-201ENST00000641059 760 ntBASIC22.54■■□□□ 1.2
POLR3DP05423 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR3DP05423 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
POLR3DP05423 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR3DP05423 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
POLR3DP05423 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR3DP05423 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
POLR3DP05423 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR3DP05423 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
POLR3DP05423 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR3DP05423 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
POLR3DP05423 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
POLR3DP05423 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
POLR3DP05423 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.53■■□□□ 1.2
POLR3DP05423 GUK1-204ENST00000366721 689 ntTSL 3 BASIC22.53■■□□□ 1.2
POLR3DP05423 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.53■■□□□ 1.2
POLR3DP05423 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.53■■□□□ 1.2
POLR3DP05423 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.53■■□□□ 1.2
POLR3DP05423 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22.53■■□□□ 1.2
POLR3DP05423 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.53■■□□□ 1.2
POLR3DP05423 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
POLR3DP05423 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
POLR3DP05423 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
POLR3DP05423 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
POLR3DP05423 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.53■■□□□ 1.2
POLR3DP05423 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
POLR3DP05423 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
POLR3DP05423 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
POLR3DP05423 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.53■■□□□ 1.2
POLR3DP05423 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
POLR3DP05423 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
POLR3DP05423 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.52■■□□□ 1.2
POLR3DP05423 AL032819.2-201ENST00000624543 2162 ntBASIC22.52■■□□□ 1.2
POLR3DP05423 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
POLR3DP05423 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
POLR3DP05423 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
POLR3DP05423 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC22.52■■□□□ 1.2
POLR3DP05423 AC092647.4-201ENST00000457211 535 ntBASIC22.52■■□□□ 1.2
POLR3DP05423 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.52■■□□□ 1.2
POLR3DP05423 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
POLR3DP05423 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.52■■□□□ 1.2
POLR3DP05423 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
POLR3DP05423 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
POLR3DP05423 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms