Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD3DP04234 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CD3DP04234 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD3DP04234 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD3DP04234 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD3DP04234 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD3DP04234 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD3DP04234 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.03■□□□□ 0.16
CD3DP04234 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.03■□□□□ 0.16
CD3DP04234 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.03■□□□□ 0.16
CD3DP04234 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CD3DP04234 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CD3DP04234 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.03■□□□□ 0.16
CD3DP04234 KRT17P1-201ENST00000399211 1546 ntBASIC16.03■□□□□ 0.16
CD3DP04234 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD3DP04234 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.03■□□□□ 0.16
CD3DP04234 PRORSD1P-202ENST00000563365 2154 ntBASIC16.03■□□□□ 0.16
CD3DP04234 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD3DP04234 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD3DP04234 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD3DP04234 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD3DP04234 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.02■□□□□ 0.16
CD3DP04234 AC106820.2-201ENST00000563775 3264 ntBASIC16.02■□□□□ 0.16
CD3DP04234 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD3DP04234 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD3DP04234 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD3DP04234 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD3DP04234 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD3DP04234 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD3DP04234 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD3DP04234 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CD3DP04234 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.02■□□□□ 0.16
CD3DP04234 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD3DP04234 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CD3DP04234 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD3DP04234 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.02■□□□□ 0.16
CD3DP04234 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD3DP04234 KRT18P11-201ENST00000435214 1283 ntBASIC16.02■□□□□ 0.16
CD3DP04234 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.02■□□□□ 0.16
CD3DP04234 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.02■□□□□ 0.16
CD3DP04234 AC008694.1-202ENST00000636953 945 ntBASIC16.02■□□□□ 0.16
CD3DP04234 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CD3DP04234 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.02■□□□□ 0.15
CD3DP04234 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.02■□□□□ 0.15
CD3DP04234 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD3DP04234 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD3DP04234 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CD3DP04234 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CD3DP04234 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD3DP04234 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD3DP04234 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD3DP04234 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD3DP04234 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD3DP04234 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CD3DP04234 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.01■□□□□ 0.15
CD3DP04234 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CD3DP04234 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.01■□□□□ 0.15
CD3DP04234 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CD3DP04234 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CD3DP04234 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CD3DP04234 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.01■□□□□ 0.15
CD3DP04234 CYP2T1P-201ENST00000432607 1285 ntBASIC16.01■□□□□ 0.15
CD3DP04234 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CD3DP04234 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.01■□□□□ 0.15
CD3DP04234 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.01■□□□□ 0.15
CD3DP04234 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.01■□□□□ 0.15
CD3DP04234 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.01■□□□□ 0.15
CD3DP04234 GNAS-203ENST00000306120 1878 ntBASIC16.01■□□□□ 0.15
CD3DP04234 AC010980.2-201ENST00000587099 1412 ntBASIC16.01■□□□□ 0.15
CD3DP04234 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.01■□□□□ 0.15
CD3DP04234 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CD3DP04234 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.01■□□□□ 0.15
CD3DP04234 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD3DP04234 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.01■□□□□ 0.15
CD3DP04234 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.01■□□□□ 0.15
CD3DP04234 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD3DP04234 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16■□□□□ 0.15
CD3DP04234 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16■□□□□ 0.15
CD3DP04234 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD3DP04234 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CD3DP04234 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD3DP04234 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms