Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DQB1P01920 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DQB1P01920 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DQB1P01920 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DQB1P01920 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
HLA-DQB1P01920 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DQB1P01920 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DQB1P01920 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 AD000864.1-201ENST00000624076 2295 ntBASIC16.33■□□□□ 0.2
HLA-DQB1P01920 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 AC068338.2-201ENST00000563278 1430 ntBASIC16.33■□□□□ 0.2
HLA-DQB1P01920 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB1P01920 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 AL355472.2-201ENST00000422958 438 ntBASIC16.32■□□□□ 0.2
HLA-DQB1P01920 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 AC137761.2-201ENST00000561729 223 ntBASIC16.32■□□□□ 0.2
HLA-DQB1P01920 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 AC145350.3-201ENST00000569033 163 ntBASIC16.32■□□□□ 0.2
HLA-DQB1P01920 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DQB1P01920 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 AC138028.4-201ENST00000564984 1845 ntBASIC16.31■□□□□ 0.2
HLA-DQB1P01920 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 CNN2P6-201ENST00000439038 900 ntBASIC16.31■□□□□ 0.2
HLA-DQB1P01920 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms