Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.44■□□□□ 0.86
TIMP1P01033 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.43■□□□□ 0.86
TIMP1P01033 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TIMP1P01033 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TIMP1P01033 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TIMP1P01033 AC008556.1-201ENST00000610908 2040 ntBASIC20.43■□□□□ 0.86
TIMP1P01033 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TIMP1P01033 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TIMP1P01033 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TIMP1P01033 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TIMP1P01033 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TIMP1P01033 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TIMP1P01033 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.43■□□□□ 0.86
TIMP1P01033 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
TIMP1P01033 AP005901.3-202ENST00000581653 237 ntBASIC20.43■□□□□ 0.86
TIMP1P01033 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TIMP1P01033 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TIMP1P01033 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TIMP1P01033 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TIMP1P01033 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TIMP1P01033 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TIMP1P01033 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
TIMP1P01033 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TIMP1P01033 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.42■□□□□ 0.86
TIMP1P01033 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.42■□□□□ 0.86
TIMP1P01033 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TIMP1P01033 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.42■□□□□ 0.86
TIMP1P01033 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.42■□□□□ 0.86
TIMP1P01033 AC092865.5-201ENST00000545435 363 ntBASIC20.42■□□□□ 0.86
TIMP1P01033 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.42■□□□□ 0.86
TIMP1P01033 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.42■□□□□ 0.86
TIMP1P01033 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.42■□□□□ 0.86
TIMP1P01033 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.42■□□□□ 0.86
TIMP1P01033 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.42■□□□□ 0.86
TIMP1P01033 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TIMP1P01033 AL391422.3-201ENST00000603791 2761 ntBASIC20.42■□□□□ 0.86
TIMP1P01033 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TIMP1P01033 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TIMP1P01033 RCC2P3-201ENST00000418112 1537 ntBASIC20.42■□□□□ 0.86
TIMP1P01033 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TIMP1P01033 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.41■□□□□ 0.86
TIMP1P01033 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TIMP1P01033 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TIMP1P01033 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TIMP1P01033 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TIMP1P01033 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TIMP1P01033 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TIMP1P01033 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.41■□□□□ 0.86
TIMP1P01033 AL031284.1-201ENST00000419297 478 ntBASIC20.41■□□□□ 0.86
TIMP1P01033 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TIMP1P01033 AC092183.1-201ENST00000469884 875 ntBASIC20.41■□□□□ 0.86
TIMP1P01033 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.41■□□□□ 0.86
TIMP1P01033 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TIMP1P01033 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.41■□□□□ 0.86
TIMP1P01033 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.41■□□□□ 0.86
TIMP1P01033 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TIMP1P01033 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.41■□□□□ 0.86
TIMP1P01033 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.41■□□□□ 0.86
TIMP1P01033 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TIMP1P01033 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.41■□□□□ 0.86
TIMP1P01033 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TIMP1P01033 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TIMP1P01033 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TIMP1P01033 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TIMP1P01033 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TIMP1P01033 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
TIMP1P01033 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.41■□□□□ 0.86
TIMP1P01033 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TIMP1P01033 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TIMP1P01033 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TIMP1P01033 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TIMP1P01033 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TIMP1P01033 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.4■□□□□ 0.86
TIMP1P01033 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TIMP1P01033 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
TIMP1P01033 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TIMP1P01033 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TIMP1P01033 MIR1233-2-201ENST00000408138 82 ntBASIC20.4■□□□□ 0.86
TIMP1P01033 MIR1233-1-201ENST00000408722 82 ntBASIC20.4■□□□□ 0.86
TIMP1P01033 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TIMP1P01033 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.4■□□□□ 0.86
TIMP1P01033 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.4■□□□□ 0.86
TIMP1P01033 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TIMP1P01033 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.4■□□□□ 0.86
TIMP1P01033 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.4■□□□□ 0.86
TIMP1P01033 MIR3180-4-201ENST00000582223 153 ntBASIC20.4■□□□□ 0.86
TIMP1P01033 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.4■□□□□ 0.86
TIMP1P01033 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TIMP1P01033 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TIMP1P01033 AL512353.2-201ENST00000448759 1962 ntBASIC20.39■□□□□ 0.86
TIMP1P01033 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TIMP1P01033 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TIMP1P01033 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.39■□□□□ 0.85
TIMP1P01033 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.39■□□□□ 0.85
TIMP1P01033 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TIMP1P01033 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TIMP1P01033 POM121L3P-201ENST00000419331 1163 ntBASIC20.39■□□□□ 0.85
TIMP1P01033 KRT18P67-201ENST00000432816 1264 ntBASIC20.39■□□□□ 0.85
TIMP1P01033 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.39■□□□□ 0.85
TIMP1P01033 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms