Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CNOT4O95628 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CNOT4O95628 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 AC092338.2-201ENST00000568827 1415 ntBASIC16.79■□□□□ 0.28
CNOT4O95628 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.78■□□□□ 0.28
CNOT4O95628 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.78■□□□□ 0.28
CNOT4O95628 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.78■□□□□ 0.28
CNOT4O95628 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.78■□□□□ 0.28
CNOT4O95628 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CNOT4O95628 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CNOT4O95628 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CNOT4O95628 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.78■□□□□ 0.28
CNOT4O95628 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.78■□□□□ 0.28
CNOT4O95628 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.78■□□□□ 0.28
CNOT4O95628 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.78■□□□□ 0.28
CNOT4O95628 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.78■□□□□ 0.28
CNOT4O95628 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CNOT4O95628 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.78■□□□□ 0.28
CNOT4O95628 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.78■□□□□ 0.28
CNOT4O95628 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CNOT4O95628 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CNOT4O95628 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CNOT4O95628 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CNOT4O95628 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT4O95628 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CNOT4O95628 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CNOT4O95628 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT4O95628 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT4O95628 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CNOT4O95628 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.77■□□□□ 0.28
CNOT4O95628 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT4O95628 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT4O95628 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CNOT4O95628 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT4O95628 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT4O95628 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT4O95628 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.77■□□□□ 0.28
CNOT4O95628 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT4O95628 HMGA1P5-201ENST00000412453 271 ntBASIC16.77■□□□□ 0.28
CNOT4O95628 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CNOT4O95628 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.77■□□□□ 0.28
CNOT4O95628 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.77■□□□□ 0.28
CNOT4O95628 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT4O95628 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT4O95628 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.77■□□□□ 0.28
CNOT4O95628 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.77■□□□□ 0.28
CNOT4O95628 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.77■□□□□ 0.28
CNOT4O95628 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT4O95628 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.77■□□□□ 0.28
CNOT4O95628 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.77■□□□□ 0.28
CNOT4O95628 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT4O95628 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.27
CNOT4O95628 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT4O95628 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.77■□□□□ 0.27
CNOT4O95628 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.77■□□□□ 0.27
CNOT4O95628 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.77■□□□□ 0.27
CNOT4O95628 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.77■□□□□ 0.27
CNOT4O95628 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT4O95628 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT4O95628 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT4O95628 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.77■□□□□ 0.27
CNOT4O95628 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT4O95628 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT4O95628 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT4O95628 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT4O95628 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT4O95628 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT4O95628 BCL2-203ENST00000589955 5011 ntBASIC16.76■□□□□ 0.27
CNOT4O95628 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.76■□□□□ 0.27
CNOT4O95628 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT4O95628 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT4O95628 TERF1P1-201ENST00000311003 1181 ntBASIC16.76■□□□□ 0.27
CNOT4O95628 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT4O95628 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CNOT4O95628 AC007663.1-201ENST00000438948 1240 ntBASIC16.76■□□□□ 0.27
CNOT4O95628 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT4O95628 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT4O95628 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT4O95628 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT4O95628 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT4O95628 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.76■□□□□ 0.27
CNOT4O95628 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT4O95628 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT4O95628 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT4O95628 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms