Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CACNA1FO60840 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.79■■□□□ 1.4
CACNA1FO60840 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CACNA1FO60840 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CACNA1FO60840 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC23.79■■□□□ 1.4
CACNA1FO60840 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.79■■□□□ 1.4
CACNA1FO60840 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC23.79■■□□□ 1.4
CACNA1FO60840 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC23.79■■□□□ 1.4
CACNA1FO60840 NTF6B-201ENST00000591913 560 ntBASIC23.79■■□□□ 1.4
CACNA1FO60840 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CACNA1FO60840 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CACNA1FO60840 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CACNA1FO60840 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CACNA1FO60840 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CACNA1FO60840 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.79■■□□□ 1.4
CACNA1FO60840 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CACNA1FO60840 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CACNA1FO60840 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CACNA1FO60840 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CACNA1FO60840 RNF152P1-201ENST00000397754 604 ntBASIC23.78■■□□□ 1.4
CACNA1FO60840 KRT18P35-201ENST00000510488 1269 ntBASIC23.78■■□□□ 1.4
CACNA1FO60840 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC23.78■■□□□ 1.4
CACNA1FO60840 AC010331.1-201ENST00000611423 582 ntBASIC23.78■■□□□ 1.4
CACNA1FO60840 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CACNA1FO60840 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CACNA1FO60840 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.78■■□□□ 1.4
CACNA1FO60840 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CACNA1FO60840 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.78■■□□□ 1.4
CACNA1FO60840 AC011558.1-201ENST00000623459 338 ntBASIC23.78■■□□□ 1.4
CACNA1FO60840 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CACNA1FO60840 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.78■■□□□ 1.4
CACNA1FO60840 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CACNA1FO60840 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CACNA1FO60840 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CACNA1FO60840 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CACNA1FO60840 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CACNA1FO60840 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CACNA1FO60840 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CACNA1FO60840 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CACNA1FO60840 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CACNA1FO60840 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
CACNA1FO60840 HLA-F-220ENST00000434407 884 ntBASIC23.77■■□□□ 1.4
CACNA1FO60840 LY6E-213ENST00000522528 606 ntTSL 3 BASIC23.77■■□□□ 1.4
CACNA1FO60840 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC23.77■■□□□ 1.4
CACNA1FO60840 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CACNA1FO60840 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CACNA1FO60840 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC23.77■■□□□ 1.4
CACNA1FO60840 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CACNA1FO60840 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CACNA1FO60840 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CACNA1FO60840 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.77■■□□□ 1.4
CACNA1FO60840 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC23.77■■□□□ 1.4
CACNA1FO60840 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.77■■□□□ 1.4
CACNA1FO60840 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CACNA1FO60840 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.77■■□□□ 1.4
CACNA1FO60840 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CACNA1FO60840 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CACNA1FO60840 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CACNA1FO60840 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23.76■■□□□ 1.39
CACNA1FO60840 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CACNA1FO60840 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC23.76■■□□□ 1.39
CACNA1FO60840 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.76■■□□□ 1.39
CACNA1FO60840 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CACNA1FO60840 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CACNA1FO60840 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CACNA1FO60840 CROCCP3-202ENST00000420820 1947 ntBASIC23.76■■□□□ 1.39
CACNA1FO60840 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC23.76■■□□□ 1.39
CACNA1FO60840 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CACNA1FO60840 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.76■■□□□ 1.39
CACNA1FO60840 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CACNA1FO60840 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.76■■□□□ 1.39
CACNA1FO60840 MIR1224-201ENST00000408193 85 ntBASIC23.76■■□□□ 1.39
CACNA1FO60840 TSPY5P-201ENST00000426936 936 ntBASIC23.76■■□□□ 1.39
CACNA1FO60840 KRT18P23-201ENST00000435622 1283 ntBASIC23.76■■□□□ 1.39
CACNA1FO60840 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC23.76■■□□□ 1.39
CACNA1FO60840 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC23.76■■□□□ 1.39
CACNA1FO60840 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CACNA1FO60840 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CACNA1FO60840 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CACNA1FO60840 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CACNA1FO60840 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
CACNA1FO60840 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CACNA1FO60840 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CACNA1FO60840 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CACNA1FO60840 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CACNA1FO60840 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CACNA1FO60840 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CACNA1FO60840 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CACNA1FO60840 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CACNA1FO60840 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CACNA1FO60840 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CACNA1FO60840 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CACNA1FO60840 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CACNA1FO60840 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC23.75■■□□□ 1.39
CACNA1FO60840 AC083906.6-201ENST00000641366 219 ntBASIC23.75■■□□□ 1.39
CACNA1FO60840 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CACNA1FO60840 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.75■■□□□ 1.39
CACNA1FO60840 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.75■■□□□ 1.39
CACNA1FO60840 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CACNA1FO60840 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms