Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC28A2O43868 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC28A2O43868 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC28A2O43868 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.2■□□□□ 0.5
SLC28A2O43868 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SLC28A2O43868 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SLC28A2O43868 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
SLC28A2O43868 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC28A2O43868 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC28A2O43868 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC28A2O43868 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC28A2O43868 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC28A2O43868 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC28A2O43868 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC28A2O43868 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC28A2O43868 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC28A2O43868 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC28A2O43868 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC28A2O43868 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC28A2O43868 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC28A2O43868 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC28A2O43868 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC28A2O43868 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.19■□□□□ 0.5
SLC28A2O43868 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SLC28A2O43868 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC28A2O43868 RNF152P1-201ENST00000397754 604 ntBASIC18.19■□□□□ 0.5
SLC28A2O43868 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
SLC28A2O43868 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC28A2O43868 FAM207BP-201ENST00000447172 505 ntBASIC18.19■□□□□ 0.5
SLC28A2O43868 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC28A2O43868 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC28A2O43868 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC28A2O43868 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SLC28A2O43868 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC28A2O43868 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC28A2O43868 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC28A2O43868 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.19■□□□□ 0.5
SLC28A2O43868 AL121906.2-201ENST00000621597 723 ntBASIC18.19■□□□□ 0.5
SLC28A2O43868 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC28A2O43868 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC28A2O43868 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC28A2O43868 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC28A2O43868 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC28A2O43868 AC124283.5-201ENST00000624661 1809 ntBASIC18.19■□□□□ 0.5
SLC28A2O43868 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SLC28A2O43868 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 IER3-202ENST00000376377 1350 ntBASIC18.18■□□□□ 0.5
SLC28A2O43868 TNXA-203ENST00000507684 2038 ntBASIC18.18■□□□□ 0.5
SLC28A2O43868 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC28A2O43868 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC28A2O43868 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SLC28A2O43868 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SLC28A2O43868 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC28A2O43868 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC28A2O43868 NIFKP9-201ENST00000419265 221 ntBASIC18.18■□□□□ 0.5
SLC28A2O43868 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC28A2O43868 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC28A2O43868 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC28A2O43868 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC28A2O43868 GPALPP1-207ENST00000611650 899 ntBASIC18.18■□□□□ 0.5
SLC28A2O43868 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.18■□□□□ 0.5
SLC28A2O43868 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC28A2O43868 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC28A2O43868 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC28A2O43868 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC28A2O43868 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC28A2O43868 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC28A2O43868 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC28A2O43868 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC28A2O43868 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
SLC28A2O43868 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC28A2O43868 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC28A2O43868 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
SLC28A2O43868 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SLC28A2O43868 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SLC28A2O43868 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC28A2O43868 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC28A2O43868 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC28A2O43868 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC28A2O43868 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC28A2O43868 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC28A2O43868 AL020996.1-203ENST00000536896 2307 ntBASIC18.17■□□□□ 0.5
SLC28A2O43868 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms