Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC112482.1-201ENST00000492080 688 ntBASIC30.61■■■□□ 2.49
CHD1O14646 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC30.61■■■□□ 2.49
CHD1O14646 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1O14646 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC30.61■■■□□ 2.49
CHD1O14646 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1O14646 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC30.61■■■□□ 2.49
CHD1O14646 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC30.61■■■□□ 2.49
CHD1O14646 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1O14646 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1O14646 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1O14646 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1O14646 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1O14646 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1O14646 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1O14646 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC30.61■■■□□ 2.49
CHD1O14646 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1O14646 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC30.6■■■□□ 2.49
CHD1O14646 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
CHD1O14646 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
CHD1O14646 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
CHD1O14646 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC30.6■■■□□ 2.49
CHD1O14646 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC30.6■■■□□ 2.49
CHD1O14646 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC30.6■■■□□ 2.49
CHD1O14646 HS6ST1P1-201ENST00000481504 1234 ntBASIC30.6■■■□□ 2.49
CHD1O14646 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC30.6■■■□□ 2.49
CHD1O14646 KRT8P3-201ENST00000519669 1449 ntBASIC30.6■■■□□ 2.49
CHD1O14646 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CHD1O14646 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC30.6■■■□□ 2.49
CHD1O14646 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CHD1O14646 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CHD1O14646 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHD1O14646 RBM17P3-201ENST00000417687 1192 ntBASIC30.59■■■□□ 2.49
CHD1O14646 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
CHD1O14646 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHD1O14646 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHD1O14646 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CHD1O14646 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
CHD1O14646 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC30.58■■■□□ 2.49
CHD1O14646 ZNF815P-204ENST00000434898 1737 ntBASIC30.58■■■□□ 2.49
CHD1O14646 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CHD1O14646 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CHD1O14646 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CHD1O14646 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CHD1O14646 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CHD1O14646 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC30.58■■■□□ 2.49
CHD1O14646 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC30.58■■■□□ 2.49
CHD1O14646 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
CHD1O14646 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CHD1O14646 AC024563.2-201ENST00000603282 481 ntBASIC30.58■■■□□ 2.49
CHD1O14646 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC30.58■■■□□ 2.49
CHD1O14646 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
CHD1O14646 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CHD1O14646 TREX1-205ENST00000625293 1783 ntBASIC30.58■■■□□ 2.49
CHD1O14646 PAN3-AS1-201ENST00000563843 1351 ntBASIC30.57■■■□□ 2.49
CHD1O14646 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.49
CHD1O14646 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CHD1O14646 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHD1O14646 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CHD1O14646 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHD1O14646 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHD1O14646 AC007967.2-201ENST00000432613 625 ntBASIC30.57■■■□□ 2.48
CHD1O14646 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC30.57■■■□□ 2.48
CHD1O14646 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC30.57■■■□□ 2.48
CHD1O14646 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC30.57■■■□□ 2.48
CHD1O14646 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHD1O14646 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
CHD1O14646 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC30.57■■■□□ 2.48
CHD1O14646 AL353692.3-201ENST00000407031 1396 ntBASIC30.57■■■□□ 2.48
CHD1O14646 KRT89P-201ENST00000620027 1478 ntBASIC30.57■■■□□ 2.48
CHD1O14646 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CHD1O14646 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
CHD1O14646 CCS-201ENST00000310190 942 ntTSL 5 BASIC30.56■■■□□ 2.48
CHD1O14646 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CHD1O14646 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC30.56■■■□□ 2.48
CHD1O14646 THAP5-204ENST00000438865 868 ntTSL 2 BASIC30.56■■■□□ 2.48
CHD1O14646 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC30.56■■■□□ 2.48
CHD1O14646 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC30.56■■■□□ 2.48
CHD1O14646 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC30.56■■■□□ 2.48
CHD1O14646 KRT8P7-201ENST00000533003 1432 ntBASIC30.56■■■□□ 2.48
CHD1O14646 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC30.56■■■□□ 2.48
CHD1O14646 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
CHD1O14646 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC30.56■■■□□ 2.48
CHD1O14646 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC30.56■■■□□ 2.48
CHD1O14646 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC30.56■■■□□ 2.48
CHD1O14646 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHD1O14646 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHD1O14646 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
CHD1O14646 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHD1O14646 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHD1O14646 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC30.55■■■□□ 2.48
CHD1O14646 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHD1O14646 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC30.55■■■□□ 2.48
CHD1O14646 AC011840.4-201ENST00000578471 627 ntBASIC30.55■■■□□ 2.48
CHD1O14646 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHD1O14646 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHD1O14646 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
CHD1O14646 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
CHD1O14646 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC30.54■■■□□ 2.48
CHD1O14646 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CHD1O14646 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms